RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 OR5AU1Q8NGC0 362 aa16.88■□□□□ 0.29
COL9A3-207ENST00000467819 OR2G2Q8NGZ5 317 aa16.88■□□□□ 0.29
COL9A3-207ENST00000467819 RFKQ969G6 155 aa16.88■□□□□ 0.29
COL9A3-207ENST00000467819 AURKAIP1Q9NWT8 199 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-207ENST00000467819 OAZ3Q9UMX2 235 aa16.88■□□□□ 0.29
COL9A3-207ENST00000467819 UBE2J1Q9Y385 318 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-207ENST00000467819 H3BUI4 141 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 OCM2P0CE71 109 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 OCMP0CE72 109 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-207ENST00000467819 FCGR1AP12314 374 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 ERP29P30040 261 aaKnown RBP16.87■□□□□ 0.29
COL9A3-207ENST00000467819 TMED1Q13445 227 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 C1orf146Q5VVC0 180 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 UTS2BQ765I0 119 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 ABHD12Q8N2K0 398 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 SPACA5Q96QH8 159 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 GAL3ST2Q9H3Q3 398 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 HMG20AQ9NP66 347 aa16.87■□□□□ 0.29
COL9A3-207ENST00000467819 EXOSC4Q9NPD3 245 aaKnown RBP16.87■□□□□ 0.29
COL9A3-207ENST00000467819 TRGV10A0A0A0MS01 117 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 SAC3D1A6NKF1 404 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 SH2D1BO14796 132 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 OR2H2O95918 312 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 CD33P20138 364 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 CDK2P24941 298 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 LOXL3P58215 753 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 CDC42P60953 191 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 BNIP1Q12981 228 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 PDZK1IP1Q13113 114 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 OR5D18Q8NGL1 313 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 CAPSLQ8WWF8 208 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 OPALINQ96PE5 141 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 FRRS1LQ9P0K9 344 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 DPM3Q9P2X0 92 aa16.86■□□□□ 0.29
COL9A3-207ENST00000467819 IGKV1-12A0A0C4DH73 117 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 ALX3O95076 343 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 IGKV1D-12P01611 117 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 PF4V1P10720 104 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 IGLL1P15814 213 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 GLIPR1P48060 266 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 NANOS3P60323 173 aaKnown RBP16.85■□□□□ 0.29
COL9A3-207ENST00000467819 CD83Q01151 205 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 SCN1BQ07699 218 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 AESQ08117 197 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 FOXB2Q5VYV0 432 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 OR52W1Q6IF63 320 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 C16orf82Q7Z2V1 217 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 RNF144BQ7Z419 303 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 CENPVQ7Z7K6 275 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-207ENST00000467819 OR10AC1Q8NH08 325 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 STMN2Q93045 179 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 SPSB1Q96BD6 273 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 AKR1E2Q96JD6 320 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 NEK6Q9HC98 313 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 IMPAD1Q9NX62 359 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 ING3Q9NXR8 418 aa16.85■□□□□ 0.29
COL9A3-207ENST00000467819 DAPL1A0PJW8 107 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 HTR1AP08908 422 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 ZNF44P15621 663 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 BRS3P32247 399 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 GDNFP39905 211 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 BDH1Q02338 343 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 ABCA11PQ4W5N1 156 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 HEPN1Q6WQI6 88 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 CCDC121Q6ZUS5 278 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 RTN4RL2Q86UN3 420 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 OR51A4Q8NGJ6 313 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 OR13C3Q8NGS6 347 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 OR13C9Q8NGT0 318 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 ZNF596Q8TC21 504 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 RNFT2Q96EX2 444 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 CENPNQ96H22 339 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-207ENST00000467819 MBOAT4Q96T53 435 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 SLC25A33Q9BSK2 321 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 OSBPL10Q9BXB5 764 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 LIN7BQ9HAP6 207 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 ZNF286AQ9HBT8 521 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 PCDHGB5Q9Y5G0 923 aa16.84■□□□□ 0.29
COL9A3-207ENST00000467819 FUOMA2VDF0 154 aa16.83■□□□□ 0.28
COL9A3-207ENST00000467819 ISG15P05161 165 aa16.83■□□□□ 0.28
COL9A3-207ENST00000467819 LPLP06858 475 aa16.83■□□□□ 0.28
COL9A3-207ENST00000467819 ARHGDIBP52566 201 aa16.83■□□□□ 0.28
COL9A3-207ENST00000467819 KPNB1Q14974 876 aaKnown RBP16.83■□□□□ 0.28
COL9A3-207ENST00000467819 COMMD4Q9H0A8 199 aa16.83■□□□□ 0.28
COL9A3-207ENST00000467819 TAS2R3Q9NYW6 316 aa16.83■□□□□ 0.28
COL9A3-207ENST00000467819 HHLA2Q9UM44 414 aa16.83■□□□□ 0.28
COL9A3-207ENST00000467819 TCRBV4S1A1TA0A5B7 111 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 SH2D7A6NKC9 451 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-207ENST00000467819 LEUTXA8MZ59 168 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 SLC16A6O15403 523 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 KDM4BO94953 1096 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 IGLV1-47P01700 117 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 PF4P02776 101 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 PTGFRP43088 359 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 RASSF2P50749 326 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 TCTEX1D4Q5JR98 221 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 FDX2Q6P4F2 183 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 KCTD20Q7Z5Y7 419 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 CORO2AQ92828 525 aa16.82■□□□□ 0.28
COL9A3-207ENST00000467819 ODAMA1E959 279 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms