RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 BAIAP2L2Q6UXY1 529 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 FAM58AQ8N1B3 248 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 BCAS4Q8TDM0 211 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 ZNF286AQ9HBT8 521 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 GLS2Q9UI32 602 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 HSPE1-MOB4S4R3N1 261 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 SH2D7A6NKC9 451 aaPredicted RBP13.7□□□□□ -0.22
HMGN1-209ENST00000463631 BUB1B-PAK6H3BSN5 160 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 KRT8P05787 483 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 NPBWR2P48146 333 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 RBP2P50120 134 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 EFNB1P98172 346 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 PTGES3Q15185 160 aaKnown RBP13.7□□□□□ -0.22
HMGN1-209ENST00000463631 FAHD1Q6P587 224 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 OR2W3Q7Z3T1 314 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 RNF144BQ7Z419 303 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 PP6455Q8WZ26 134 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 P2RX4Q99571 388 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 ZNF649Q9BS31 505 aa13.7□□□□□ -0.22
HMGN1-209ENST00000463631 FUOMA2VDF0 154 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 H0YHG0 523 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 INMTO95050 263 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 CYB5AP00167 134 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 SERPINA3P01011 423 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 CSN2P05814 226 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 BCL3P20749 454 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 DUSP1P28562 367 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 GDNFP39905 211 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 MNDAP41218 407 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 SSX6Q7RTT6 188 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 BCDIN3DQ7Z5W3 292 aaKnown RBP13.69□□□□□ -0.22
HMGN1-209ENST00000463631 CHPT1Q8WUD6 406 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 NRBF2Q96F24 287 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 PCDHB16Q9NRJ7 776 aa13.69□□□□□ -0.22
HMGN1-209ENST00000463631 FAM172BPA6NC97 362 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A18PA6NE21 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A16PA6NEW6 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A20PA6NIJ5 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A9PA6NNJ1 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A12PA8MX19 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A5PA8MXJ8 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 RPP14O95059 124 aaKnown RBP13.68□□□□□ -0.22
HMGN1-209ENST00000463631 CCDC159P0C7I6 412 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A15PP0C7V4 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A13PP0C7W8 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A14PP0C7W9 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM90A24PP0C7X0 464 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 FAM106CPP0CH98 169 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 PRKACAP17612 351 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 CALB2P22676 271 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 LMO1P25800 156 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 MYCNOSP40205 109 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 OR3A4PP47883 348 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 ATP1B3P54709 279 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 DGCR2P98153 550 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 ODF4Q2M2E3 257 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 C9orf152Q5JTZ5 239 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 THNSL2Q86YJ6 484 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 GID4Q8IVV7 300 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 YIPF7Q8N8F6 280 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 TMEM163Q8TC26 289 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 HMG20AQ9NP66 347 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 EXOSC4Q9NPD3 245 aaKnown RBP13.68□□□□□ -0.22
HMGN1-209ENST00000463631 ZFP57Q9NU63 452 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 U3KQK5 164 aa13.68□□□□□ -0.22
HMGN1-209ENST00000463631 LOC107986453A0A1B0GWG9 222 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 ODAMA1E959 279 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 SIRPB1O00241 398 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 TOR1AO14656 332 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 SH2D1BO14796 132 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 SULT1C4O75897 302 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 OR2H2O95918 312 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 UBCP0CG48 685 aaKnown RBP13.67□□□□□ -0.22
HMGN1-209ENST00000463631 PTGFRP43088 359 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 GLIPR1P48060 266 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 POU3F4P49335 361 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 PRRX1P54821 245 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 GP2P55259 537 aaKnown RBP13.67□□□□□ -0.22
HMGN1-209ENST00000463631 CBX1P83916 185 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 UNQ9370/PRO34162Q6UXP9 181 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 C8orf86Q6ZUL3 223 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 UTS2BQ765I0 119 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 ZNF329Q86UD4 541 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 COMMD1Q8N668 190 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 TCEANCQ8N8B7 351 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 OR4D6Q8NGJ1 314 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 COMMD4Q9H0A8 199 aa13.67□□□□□ -0.22
HMGN1-209ENST00000463631 H2AFY2Q9P0M6 372 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-209ENST00000463631 IGKV1-9A0A0C4DH69 117 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 METTL15A6NJ78 407 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 ZNF729A6NN14 1252 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-209ENST00000463631 H3BSH0 61 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 M0R129 80 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 FGF16O43320 207 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 RAMP3O60896 148 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 FKBP6O75344 327 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 PRKACBP22694 351 aa13.66□□□□□ -0.22
HMGN1-209ENST00000463631 MTCP1P56278 107 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms