RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PKD1L1	Q8TDX9	2849 aa		10.46	□□□□□ -0.74
FDPS-204	ENST00000461507	IGKV1-12	A0A0C4DH73	117 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	MDFIC2	A0A1B0GVS7	189 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PPH5	198 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PRD5	423 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PRF3	423 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PRM7	423 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	POM121C	A8CG34	1229 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	HSPB6	O14558	160 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	SH2D1B	O14796	132 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	KDM4B	O94953	1096 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	IGKV1D-12	P01611	117 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	CSTB	P04080	98 aa	Known RBP	10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	TK1	P04183	234 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	SERPINA2	P20848	420 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	TGFBR2	P37173	567 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	CAV3	P56539	151 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	RPL31	P62899	125 aa	Known RBP	10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	PDCD1	Q15116	288 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	GRK1	Q15835	563 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	DEFB112	Q30KQ8	113 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	RNLS	Q5VYX0	342 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	RUSC1-AS1	Q66K80	236 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	TMEM86B	Q8N661	226 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	PPP1R35	Q8TAP8	253 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	THRSP	Q92748	146 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	DERL3	Q96Q80	235 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	SIRPD	Q9H106	197 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	SLITRK2	Q9H156	845 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	DUSP21	Q9H596	190 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	UNKL	Q9H9P5	680 aa	Known RBP	10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	TCF7L1	Q9HCS4	588 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	HMG20A	Q9NP66	347 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	C19orf12	Q9NSK7	152 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	MEGF8	Q7Z7M0	2845 aa		10.45	□□□□□ -0.74
FDPS-204	ENST00000461507	TRAV8-7	A0A075B6U6	113 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	TRBV23-1	A0A0A0MS06	115 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	MAGEA13P	A6NCF6	341 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	RRP9	O43818	475 aa	Known RBP	10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	CDRT1	O95170	752 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	DLX1	P56177	255 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	ZP1	P60852	638 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	RPS11	P62280	158 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	INSL4	Q14641	139 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	IRF3	Q14653	427 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	ACSM3	Q53FZ2	586 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	SPIN3	Q5JUX0	258 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	ASPHD2	Q6ICH7	369 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	C16orf87	Q6PH81	154 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	CEACAM19	Q7Z692	300 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	TRAPPC6B	Q86SZ2	158 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	SAXO1	Q8IYX7	474 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	SVOP	Q8N4V2	548 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	MUL1	Q969V5	352 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	ZDHHC16	Q969W1	377 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	DMRTB1	Q96MA1	342 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	METTL9	Q9H1A3	318 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	LSM2	Q9Y333	95 aa	Known RBP	10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	KPTN	Q9Y664	436 aa		10.44	□□□□□ -0.74
FDPS-204	ENST00000461507	CENPVL3	A0A0U1RRI6	287 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	DEGS1	O15121	323 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	HOXA3	O43365	443 aa	Predicted RBP	10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	DENR	O43583	198 aa	Known RBP	10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	ALX3	O95076	343 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	OR2H2	O95918	312 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	FST	P19883	344 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	PTGFR	P43088	359 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	MTNR1B	P49286	362 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	GABARAPL2	P60520	117 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	RPS25	P62851	125 aa	Known RBP	10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	ACSM1	Q08AH1	577 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	KLRD1	Q13241	179 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	TBCE	Q15813	527 aa	Predicted RBP	10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	SLC22A6	Q4U2R8	563 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	FAM27D1	Q5T7N8	215 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	AWAT2	Q6E213	333 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507		Q6YL49	198 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	ZNF367	Q7RTV3	350 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	OR8H2	Q8N162	312 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	MS4A15	Q8N5U1	240 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	TPRX1	Q8N7U7	411 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	SNX22	Q96L94	193 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	MGLL	Q99685	303 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	FAM234A	Q9H0X4	552 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	PPA2	Q9H2U2	334 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	TNFRSF19	Q9NS68	423 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	FOXJ3	Q9UPW0	622 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	POMT1	Q9Y6A1	747 aa		10.43	□□□□□ -0.74
FDPS-204	ENST00000461507	TRBV5-7	A0A0A0MS05	114 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1B0GUS0	222 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	hCG_1809904	A0A1W2PP81	198 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PPE2	198 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PR64	198 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507		A0A1W2PRV1	198 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	TMEM82	A0PJX8	343 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507		K7N7A8	449 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	WIPF1	O43516	503 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	NDUFA7	O95182	113 aa		10.42	□□□□□ -0.74
FDPS-204	ENST00000461507	ALDOB	P05062	364 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms