RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 DOCK8Q8NF50 2099 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 EFNA2O43921 213 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 SSSCA1O60232 199 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 OPN1LWP04000 364 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 MRPS21P82921 87 aaKnown RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 H3F3AP84243 136 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 USF2Q15853 346 aaPredicted RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 KIAA0895LQ68EN5 471 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 SP5Q6BEB4 398 aaPredicted RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 LANCL3Q6ZV70 420 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 ZNF695Q8IW36 515 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 D2HGDHQ8N465 521 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 SUMF1Q8NBK3 374 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 KLRF1Q9NZS2 232 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 CA14Q9ULX7 337 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 THADAQ6YHU6 1953 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 C9J4A7 227 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 DVL1O14640 695 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 PHOX2AO14813 284 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 NR2C1P13056 603 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 GABRG2P18507 467 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 DYNLT3P51808 116 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 RND2P52198 227 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 BAXQ07812 192 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 FOXO1Q12778 655 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 HIST3H3Q16695 136 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 ZNF100Q8IYN0 542 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 THAP3Q8WTV1 239 aaPredicted RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM171Q8WVE6 324 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 MISP3Q96FF7 219 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 ABHD14BQ96IU4 210 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 NOL4LQ96MY1 436 aaPredicted RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 CRLF2Q9HC73 371 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 GPR173Q9NS66 373 aa11.92□□□□□ -0.5
PTPRE-204ENST00000455661 UBE2J1Q9Y385 318 aaPredicted RBP11.92□□□□□ -0.5
PTPRE-204ENST00000455661 USP34Q70CQ2 3546 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 LOC102723971A0A1B0GUV8 181 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 MPPED1O15442 326 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 ANGPTL7O43827 346 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 PGA5P0DJD9 388 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 CEACAM1P13688 526 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 MSR1P21757 451 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 MSX1P28360 303 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 CCR5P51681 352 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 RAB11AP62491 216 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
PTPRE-204ENST00000455661 ZNF385CQ66K41 422 aaPredicted RBP11.91□□□□□ -0.5
PTPRE-204ENST00000455661 FAM185AQ8N0U4 392 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 SPSB1Q96BD6 273 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 SNX22Q96L94 193 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 TP53TG5Q9Y2B4 290 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 RP1P56715 2156 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 A0A1W2PNR3 127 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 PROB1E7EW31 1015 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 ETV2O00321 342 aaPredicted RBP11.91□□□□□ -0.5
PTPRE-204ENST00000455661 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
PTPRE-204ENST00000455661 SPRY1O43609 319 aaPredicted RBP11.91□□□□□ -0.5
PTPRE-204ENST00000455661 PAX1P15863 534 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 SLC25A53Q5H9E4 307 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 C1orf189Q5VU69 101 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM217Q8N7C4 229 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 RAB24Q969Q5 203 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM222Q9H0R3 208 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 HIPK2Q9H2X6 1198 aa11.91□□□□□ -0.5
PTPRE-204ENST00000455661 PTRH2Q9Y3E5 179 aaKnown RBP11.91□□□□□ -0.5
PTPRE-204ENST00000455661 IGHV3-20A0A0C4DH32 117 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 H3BMH7 237 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 CST7O76096 145 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 OPN1MWP04001 364 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 OPN1MW2P0DN77 364 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 OPN1MW3P0DN78 364 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 PNLIPP16233 465 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 FUT3P21217 361 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 AADACP22760 399 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 PLPPR5Q32ZL2 321 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 Q6ZSR3 168 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM183AQ8IXX5 376 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 IL22RA1Q8N6P7 574 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 OR5L2Q8NGL0 311 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 CABLES2Q9BTV7 478 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 GPR87Q9BY21 358 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 MAGT1Q9H0U3 335 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 GLRX2Q9NS18 164 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 GPR27Q9NS67 375 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 GNG13Q9P2W3 67 aa11.9□□□□□ -0.5
PTPRE-204ENST00000455661 TRBV24-1A0A075B6N3 115 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 A0A1B0GU03 582 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 FAM221AA4D161 298 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 TCAPO15273 167 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 MMP9P14780 707 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 DRD1P21728 446 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 RUNX1Q01196 453 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 CNN3Q15417 329 aaKnown RBP11.89□□□□□ -0.51
PTPRE-204ENST00000455661 TCEAL6Q6IPX3 200 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 C20orf196Q8IYI0 205 aa11.89□□□□□ -0.51
PTPRE-204ENST00000455661 OR1L3Q8NH93 324 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms