RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 EFNB1P98172 346 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 UBE2V2Q15819 145 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 FAM189A2Q15884 450 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 C2orf68Q2NKX9 166 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 BEAN1Q3B7T3 259 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 CLVS2Q5SYC1 327 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 BCL2L15Q5TBC7 163 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 TMEM42Q69YG0 159 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 DEGS2Q6QHC5 323 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 BAIAP2L2Q6UXY1 529 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 RNF144BQ7Z419 303 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 AMIGO2Q86SJ2 522 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF573Q86YE8 665 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC35F2Q8IXU6 374 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ELMOD2Q8IZ81 293 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 RDH10Q8IZV5 341 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF561Q8N587 486 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 KLHDC1Q8N7A1 406 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 YIPF7Q8N8F6 280 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ASCC1Q8N9N2 400 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 OR52N4Q8NGI2 321 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 OR2T6Q8NHC8 308 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ASB17Q8WXJ9 295 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 SLAMF9Q96A28 289 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 TEX12Q9BXU0 123 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 CADM1Q9BY67 442 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 FAM234AQ9H0X4 552 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 MMP28Q9H239 520 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 HEXA-AS1Q9H8Q6 139 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ADGRL4Q9HBW9 690 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 HEYLQ9NQ87 328 aaPredicted RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 PAPOLBQ9NRJ5 636 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 SERTAD4Q9NUC0 356 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 RASL12Q9NYN1 266 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 MTCH1Q9NZJ7 389 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 IL36RNQ9UBH0 155 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 NUFIP1Q9UHK0 495 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 MRM2Q9UI43 246 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 OR52A1Q9UKL2 312 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 POMPQ9Y244 141 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 HILPDAQ9Y5L2 63 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 R4GMQ9 66 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 V9GYS6 101 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 TGP01266 2768 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 TRGV11A0A075B6L2 103 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 A0A1W2PQL4 384 aaPredicted RBP3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 FAM90A8PA6NJQ4 464 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 MARCH11A6NNE9 402 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 C17orf98A8MV24 154 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 ZNF670-ZNF695F2Z2N8 137 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 G3V2T6 193 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 J3QT63 122 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 K7N7A8 449 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 DLGAP1O14490 977 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 SYT7O43581 403 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 RGS10O43665 173 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 NOS1APO75052 506 aaPredicted RBP3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 MMP23AO75900 390 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 SPDEFO95238 335 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 TNFRSF6BO95407 300 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 OPN1MWP04001 364 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 CHRM2P08172 466 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 OPN1MW2P0DN77 364 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 OPN1MW3P0DN78 364 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 ATP6V1B1P15313 513 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 ZNF20P17024 532 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 BCL3P20749 454 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 CD24P25063 80 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 NPBWR2P48146 333 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 ERVK11-1P61568 191 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 DYNC1I2Q13409 638 aaKnown RBP3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 DYRK1AQ13627 763 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 GK3PQ14409 553 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 EDDM3AQ14507 147 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 SMIM21Q3B7S5 101 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 ZNF829Q3KNS6 432 aaPredicted RBP3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 TMEM95Q3KNT9 176 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 TP53I3Q53FA7 332 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 LCN1P1Q5VSP4 162 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 AADACL4Q5VUY2 407 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 SLX4IPQ5VYV7 408 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 NXNL2Q5VZ03 156 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 FAHD1Q6P587 224 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 SLC25A26Q70HW3 274 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 EGFL6Q8IUX8 553 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 PRSS35Q8N3Z0 413 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 OR4C13Q8NGP0 309 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 OR5K1Q8NHB7 308 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 TMEM163Q8TC26 289 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 MALSU1Q96EH3 234 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 CNN2Q99439 309 aaKnown RBP3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 CITED2Q99967 270 aaPredicted RBP3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 NRIP2Q9BQI9 281 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 CDCA4Q9BXL8 241 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 NPFFR1Q9GZQ6 430 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 CHST6Q9GZX3 395 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 ZNF702PQ9H963 129 aa3.77□□□□□ -1.81
GTF3C3-208ENST00000455546 HES4Q9HCC6 221 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms