RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	BARX1	Q9HBU1	254 aa	Predicted RBP	5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HRASLS	Q9HDD0	168 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	SIRT7	Q9NRC8	400 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	B3GNT2	Q9NY97	397 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HAO2	Q9NYQ3	351 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZNF224	Q9NZL3	707 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	CNOT2	Q9NZN8	540 aa	Known RBP	5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	GSKIP	Q9P0R6	139 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	IKZF2	Q9UKS7	526 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	MYRF	Q9Y2G1	1151 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	GSTK1	Q9Y2Q3	226 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RNF115	Q9Y4L5	304 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	LHFPL6	Q9Y693	200 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HCFC1	P51610	2035 aa		5.3	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ATM	Q13315	3056 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	IGSF10	Q6WRI0	2623 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	LAMA5	O15230	3695 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	NBAS	A2RRP1	2371 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	DAPL1	A0PJW8	107 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	TMEM213	A2RRL7	107 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	SMCO3	A2RU48	225 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	C5orf49	A4QMS7	147 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638		E9PQ18	207 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638		F5H5K5	113 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	FADS2	O95864	444 aa	Known RBP	5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ABHD16A	O95870	558 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	IFNA5	P01569	189 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZNF44	P15621	663 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZNF14	P17017	642 aa	Predicted RBP	5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	MYL12A	P19105	171 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZP3	P21754	424 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	CEACAM6	P40199	344 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RPS27	P42677	84 aa	Known RBP	5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	SLC6A9	P48067	706 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	FABP6	P51161	128 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	CCR6	P51684	374 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ISL1	P61371	349 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RPS23	P62266	143 aa	Known RBP	5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HERV-K104	P63124	156 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HIST1H3A	P68431	136 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	BSPH1	Q075Z2	132 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	GGTLC2	Q14390	218 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HAGH	Q16775	308 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ANKRD55	Q3KP44	614 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	DNLZ	Q5SXM8	178 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HIST2H3PS2	Q5TEC6	136 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ADAM5	Q6NVV9	412 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	CFAP77	Q6ZQR2	320 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HIST2H3A	Q71DI3	136 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	FAM220A	Q7Z4H9	259 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	CDC20B	Q86Y33	519 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	C1orf174	Q8IYL3	243 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	MTURN	Q8N3F0	131 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZNF283	Q8N7M2	679 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	BPIFB6	Q8NFQ5	453 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	OR1M1	Q8NGA1	313 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	OR5L1	Q8NGL2	311 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	OTOS	Q8NHW6	89 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RAB40A	Q8WXH6	277 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RAX2	Q96IS3	184 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	POM121L2	Q96KW2	1035 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	C4orf45	Q96LM5	186 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	DCUN1D5	Q9BTE7	237 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ABHD6	Q9BV23	337 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	GGACT	Q9BVM4	153 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	MRO	Q9BYG7	248 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	TMEM231	Q9H6L2	316 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ADGRL4	Q9HBW9	690 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	NOX3	Q9HBY0	568 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	AMBN	Q9NP70	447 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	BEX4	Q9NWD9	120 aa	Predicted RBP	5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	BABAM2	Q9NXR7	383 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	PTTG3P	Q9NZH4	202 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	NPAP1	Q9NZP6	1156 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	TPRKB	Q9Y3C4	175 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	AUP1	Q9Y679	476 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZZEF1	O43149	2961 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	BSN	Q9UPA5	3926 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	FREM1	Q5H8C1	2179 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZFYVE26	Q68DK2	2539 aa		5.29	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ZNF462	Q96JM2	2506 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	PCNX1	Q96RV3	2341 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RP1L1	Q8IWN7	2480 aa	Predicted RBP	5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	IGHV2OR16-5	A0A0B4J2B6	119 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	DEFB108A	A8MXU0	73 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638		M0R135	149 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	SNAI2	O43623	268 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	SYNGR3	O43761	229 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	CST4	P01036	141 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	TACSTD2	P09758	323 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	EGR1	P18146	543 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ALOX5AP	P20292	161 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RPS19	P39019	145 aa	Known RBP	5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	ID1	P41134	155 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RPL5	P46777	297 aa	Known RBP	5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	HCCS	P53701	268 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	SSBP2	P81877	361 aa	Predicted RBP	5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	FGL1	Q08830	312 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	RAB40B	Q12829	278 aa		5.28	□□□□□ -1.56
ECHDC1-208	ENST00000436638	MALL	Q13021	153 aa		5.28	□□□□□ -1.56

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