RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ABCD4O14678 606 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 ICOSLGO75144 302 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 SCO1O75880 301 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 STK17BO94768 372 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 SNAPINO95295 136 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 IGLV3-19P01714 112 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 APOC3P02656 99 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 CA3P07451 260 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 DCNP07585 359 aaKnown RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 SPP1P10451 314 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 FGF5P12034 268 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF250P15622 560 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 HLA-GP17693 338 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 IGFBP3P17936 291 aaPredicted RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 CSRP1P21291 193 aaKnown RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 HCCSP53701 268 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 TAS2R46P59540 309 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 LCN6P62502 163 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 PPIAP62937 165 aaKnown RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 BTG2P78543 158 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF117Q03924 483 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 SCRN3Q0VDG4 424 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 CD226Q15762 336 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 PAN3Q58A45 887 aaKnown RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 C1orf140Q5VVS0 124 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF660Q6AZW8 331 aaPredicted RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 OR7E24Q6IFN5 339 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 SLC25A42Q86VD7 318 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 PRSS35Q8N3Z0 413 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 GBGT1Q8N5D6 347 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF611Q8N823 705 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 GATSQ8NAP1 163 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 CCDC54Q8NEL0 328 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 OR4K17Q8NGC6 315 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 OR8S1Q8NH09 359 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 OR8K3Q8NH51 312 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 CCL4L1Q8NHW4 92 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 MITD1Q8WV92 249 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 AQP3Q92482 292 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 DDIT4LQ96D03 193 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 TSNAXQ99598 290 aaKnown RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 RAB33BQ9H082 229 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 AKIRIN1Q9H9L7 192 aaPredicted RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 TAS2R4Q9NYW5 299 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 SHPKQ9UHJ6 478 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 RALYQ9UKM9 306 aaKnown RBP4.27□□□□□ -1.73
LINC00458-202ENST00000427299 MMP17Q9ULZ9 603 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 B9D1Q9UPM9 204 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 POLR1DQ9Y2S0 133 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 WIF1Q9Y5W5 379 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 TMED7-TICAM2A0A0A6YYA0 188 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 C13orf42A0A1B0GVH6 325 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 RNF222A6NCQ9 220 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 C15orf62A8K5M9 175 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 C11orf98E9PRG8 122 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 H7C2Y5 167 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 TAAR5O14804 337 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF208O43345 1280 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 DUX1O43812 170 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 GPR137BO60478 399 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 SLC16A7O60669 478 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 ATG12O94817 140 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 DUS4LO95620 317 aaKnown RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 CLPSP04118 112 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 IGKV3-11P04433 115 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 FCER2P06734 321 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 CRHP06850 196 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 CSN3P07498 182 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 H2BFMP0C1H6 154 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 PVALBP20472 110 aaPredicted RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 PAX6P26367 422 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 FUT6P51993 359 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF133P52736 654 aaPredicted RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 RPS15P62841 145 aaKnown RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 S100A12P80511 92 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 DEFA5Q01523 94 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 ZP4Q12836 540 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 BTN1A1Q13410 526 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 SMCO1Q147U7 214 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 EBPQ15125 230 aaKnown RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 SURF2Q15527 256 aaPredicted RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 HMGN3Q15651 99 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 ACKR1Q16570 336 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 CDNFQ49AH0 187 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 LY6G6FQ5SQ64 297 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 VAX1Q5SQQ9 334 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 GLYATL3Q5SZD4 288 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 C3orf33Q6P1S2 294 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 HAGHLQ6PII5 290 aaPredicted RBP4.26□□□□□ -1.73
LINC00458-202ENST00000427299 DRAM2Q6UX65 266 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 DGAT2L6Q6ZPD8 337 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 SLC35D2Q76EJ3 337 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 TRAPPC6BQ86SZ2 158 aa4.26□□□□□ -1.73
LINC00458-202ENST00000427299 SKA3Q8IX90 412 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms