RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	SNU13	P55769	128 aa	Known RBP	6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	GRB2	P62993	217 aa	Known RBP	6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	CBX1	P83916	185 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	LINC01590	Q5TEZ4	76 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	PLCXD3	Q63HM9	321 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	LINC00322	Q6ZN03	302 aa	Predicted RBP	6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	RRM2B	Q7LG56	351 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	THNSL2	Q86YJ6	484 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SGPP2	Q8IWX5	399 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SLC37A3	Q8NCC5	494 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR8D4	Q8NGM9	314 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR6Q1	Q8NGQ2	317 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	IL17D	Q8TAD2	202 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	RNF133	Q8WVZ7	376 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	KCTD7	Q96MP8	289 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	THAP7	Q9BT49	309 aa	Predicted RBP	6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	MED20	Q9H944	212 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	PLSCR3	Q9NRY6	295 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ING3	Q9NXR8	418 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	MTCH1	Q9NZJ7	389 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	TMEM5	Q9Y2B1	443 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	LINC00312	Q9Y6C7	94 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	WSB1	Q9Y6I7	421 aa		6.58	□□□□□ -1.36
NIF3L1-206	ENST00000416651	hADV38S2	A0JD32	116 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	CXorf65	A6NEN9	183 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651		J3QT63	122 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ANGPT2	O15123	496 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	FGF16	O43320	207 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SLC6A6	P31641	620 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR3A1	P47881	315 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	GLIPR1	P48060	266 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	REG1B	P48304	166 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ESRRG	P62508	458 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	MEF2C	Q06413	473 aa	Predicted RBP	6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	GRK1	Q15835	563 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	C17orf58	Q2M2W7	97 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ASRGL1	Q7L266	308 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	TRAPPC6B	Q86SZ2	158 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	LYPD6	Q86Y78	171 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR5A2	Q8NGI9	324 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR4C15	Q8NGM1	316 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR6N2	Q8NGY6	317 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	CCDC28B	Q9BUN5	200 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ABCG5	Q9H222	651 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NIPAL2	Q9H841	368 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	PLEKHA3	Q9HB20	300 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ENPP4	Q9Y6X5	453 aa		6.57	□□□□□ -1.36
NIF3L1-206	ENST00000416651	UBR4	Q5T4S7	5183 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	IGKV1-27	A0A075B6S5	117 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	PQLC2L	A1A4F0	135 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NCBP2L	A6PVI3	153 aa	Known RBP	6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	PRR32	B1ATL7	298 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	IGLV1-51	P01701	117 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	H1F0	P07305	194 aa	Known RBP	6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SPI1	P17947	270 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	CFL1	P23528	166 aa	Known RBP	6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	GABRR1	P24046	479 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	CD34	P28906	385 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	PPIF	P30405	207 aa	Known RBP	6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	IFNA8	P32881	189 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	HCCS	P53701	268 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	F2RL1	P55085	397 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	RUNX1	Q01196	453 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	CRMP1	Q14194	572 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	IFI44L	Q53G44	452 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	TEX30	Q5JUR7	227 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	KRT74	Q7RTS7	529 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	TRPM8	Q7Z2W7	1104 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651		Q8N6K4	173 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	FAM86B1	Q8N7N1	296 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR6K6	Q8NGW6	343 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ZNF596	Q8TC21	504 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	TOMM40L	Q969M1	308 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SLAMF9	Q96A28	289 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SNX22	Q96L94	193 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	MNT	Q99583	582 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NMNAT2	Q9BZQ4	307 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NDEL1	Q9GZM8	345 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	VSIG4	Q9Y279	399 aa		6.56	□□□□□ -1.36
NIF3L1-206	ENST00000416651	OR5B21	A6NL26	309 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	FAM220BP	B1ANY3	271 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SIRPB1	O00241	398 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	TOR1A	O14656	332 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	HSPA12A	O43301	675 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SOX15	O60248	233 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SERPINA1	P01009	418 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	IFNA14	P01570	189 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	H2BFM	P0C1H6	154 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NCK1	P16333	377 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NFYB	P25208	207 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	FMO3	P31513	532 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	MNDA	P41218	407 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	SLC15A1	P46059	708 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	NPBWR2	P48146	333 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	AES	Q08117	197 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	HEPN1	Q6WQI6	88 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ZBTB49	Q6ZSB9	765 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	RTN4RL2	Q86UN3	420 aa		6.55	□□□□□ -1.36
NIF3L1-206	ENST00000416651	ERI1	Q8IV48	349 aa	Known RBP	6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms