RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 NPBWR2P48146 333 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 POU3F4P49335 361 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 DYNLT3P51808 116 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 PRB3Q04118 309 aaPredicted RBP11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 ZNF626Q68DY1 528 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 RPL22L1Q6P5R6 122 aaKnown RBP11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 TMPRSS11AQ6ZMR5 421 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 PACRGLQ8N7B6 248 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 OR4C13Q8NGP0 309 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 CORO2AQ92828 525 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 ZNF649Q9BS31 505 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 NPFFR1Q9GZQ6 430 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 PPA2Q9H2U2 334 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 GAL3ST2Q9H3Q3 398 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 TCF7L1Q9HCS4 588 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 EXOSC4Q9NPD3 245 aaKnown RBP11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 RBFOX1Q9NWB1 397 aaKnown RBP11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 TAS2R3Q9NYW6 316 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 DHDHQ9UQ10 334 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 ODF3BA8MYP8 253 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 SULT1B1O43704 296 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 ARG1P05089 322 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 CSN2P05814 226 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 CD2P06729 351 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 PIPP12273 146 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 GABRA5P31644 462 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 MED21Q13503 144 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 KISS1Q15726 138 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 ELP2Q6IA86 826 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 CRIP3Q6Q6R5 217 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 RTN4RL2Q86UN3 420 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 BATF2Q8N1L9 274 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 SETD9Q8NE22 299 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 PXT1Q8NFP0 134 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 OR52N4Q8NGI2 321 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 OR51A4Q8NGJ6 313 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 OR52I1Q8NGK6 324 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 CREB3L1Q96BA8 519 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 MMP27Q9H306 513 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 NCOR1P1Q9H4R4 102 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 ISG20L2Q9H9L3 353 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 AMBNQ9NP70 447 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 ABCB10Q9NRK6 738 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 SESN1Q9Y6P5 492 aa11.79□□□□□ -0.52
NIF3L1-205ENST00000409588 TRGV10A0A0A0MS01 117 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 PSPNO60542 156 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 INMTO95050 263 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 ALDOBP05062 364 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 HCKP08631 526 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 RAB3AP20336 220 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 COX7A1P24310 79 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 MTNR1BP49286 362 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 P2RX3P56373 397 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 IL18R1Q13478 541 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 OR13C9Q8NGT0 318 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 OR2T6Q8NHC8 308 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 PIFOQ8TCI5 191 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 RPS4Y2Q8TD47 263 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 TMEM133Q9H2Q1 129 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 PCDHB16Q9NRJ7 776 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 AASSQ9UDR5 926 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 GSTK1Q9Y2Q3 226 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 HSPE1-MOB4S4R3N1 261 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 TRRAPQ9Y4A5 3859 aa11.78□□□□□ -0.52
NIF3L1-205ENST00000409588 A0A0G2JK05 382 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 DEGS1O15121 323 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 OR2H2O95918 312 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 LIMS3P0CW19 117 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 LIMS4P0CW20 117 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 TMEM225BP0DP42 221 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 ARHGDIBP52566 201 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 EDDM3AQ14507 147 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 ASPHD2Q6ICH7 369 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF529Q6P280 563 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 HEPN1Q6WQI6 88 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF782Q6ZMW2 699 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF565Q8N9K5 539 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 Q8NFD4 153 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 OR4S1Q8NGB4 309 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 OR10AC1Q8NH08 325 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF596Q8TC21 504 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 TSEN15Q8WW01 171 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 C17orf50Q8WW18 174 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 APH1BQ8WW43 257 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 CLEC7AQ9BXN2 247 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 BABAM2Q9NXR7 383 aa11.77□□□□□ -0.53
NIF3L1-205ENST00000409588 IGKV1-12A0A0C4DH73 117 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 WBP4O75554 376 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 IGKV1D-12P01611 117 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 MYL12AP19105 171 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 DUSP1P28562 367 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 OR3A1P47881 315 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 KCNJ3P48549 501 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 DYNC1I2Q13409 638 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 SSX2Q16385 188 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 ZNF691Q5VV52 312 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 Q6ZTK2 550 aa11.76□□□□□ -0.53
NIF3L1-205ENST00000409588 TRAPPC6BQ86SZ2 158 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms