RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 UBE2L6O14933 153 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 DHHO43323 396 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 PRRX1P54821 245 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 MRGPREQ86SM8 312 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 OR1N1Q8NGS0 311 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 SPSB1Q96BD6 273 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 HIST1H4GQ99525 98 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 DNAL4O96015 105 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 LGALS7P47929 136 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
RERE-204ENST00000400908 TWIST1Q15672 202 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 SPINK9Q5DT21 86 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 SLC25A30Q5SVS4 291 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 KISS1RQ969F8 398 aaPredicted RBP12.36□□□□□ -0.43
RERE-204ENST00000400908 SMCHD1A6NHR9 2005 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 RPS27P42677 84 aaKnown RBP12.36□□□□□ -0.43
RERE-204ENST00000400908 KIR3DL2P43630 455 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 SPANXN1Q5VSR9 72 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 RER1O15258 196 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
RERE-204ENST00000400908 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 FGF20Q9NP95 211 aaPredicted RBP12.36□□□□□ -0.43
RERE-204ENST00000400908 VAX2Q9UIW0 290 aa12.36□□□□□ -0.43
RERE-204ENST00000400908 PDE6DO43924 150 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 CEACAM3P40198 252 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 Q7L0L9 218 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 FAM206AQ9NX38 181 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 C9orf170A2RU37 121 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 IGLV3-27P01718 113 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 GNG3P63215 75 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 LEMD1Q68G75 181 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 TRILQ7L0X0 811 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 MRGPRX4Q96LA9 322 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 IP6K3Q96PC2 410 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 ISG20L2Q9H9L3 353 aaKnown RBP12.35□□□□□ -0.43
RERE-204ENST00000400908 PLPP1O14494 284 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 TNFSF11O14788 317 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 SRSF10O75494 262 aaKnown RBP12.35□□□□□ -0.43
RERE-204ENST00000400908 ZNF137PP52743 207 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 DHRS2Q13268 280 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 CIRBPQ14011 172 aaKnown RBP12.35□□□□□ -0.43
RERE-204ENST00000400908 KIR3DX1Q9H7L2 352 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 TRGV8A0A0C4DH27 118 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 BRS3P32247 399 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 SPATA45Q537H7 98 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 TMEM207Q6UWW9 146 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 STPG2Q8N412 459 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 GABRG3Q99928 467 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 TRAF4Q9BUZ4 470 aaPredicted RBP12.35□□□□□ -0.43
RERE-204ENST00000400908 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
RERE-204ENST00000400908 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 HBZP02008 142 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 CRHP06850 196 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 PFN3P60673 137 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 SPATA46Q5T0L3 261 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 TMEM136Q6ZRR5 245 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 RNF165Q6ZSG1 346 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 BEND2Q8NDZ0 799 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 OR4P4Q8NGL7 312 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 PDXPQ96GD0 296 aa12.35□□□□□ -0.43
RERE-204ENST00000400908 OR4C45A6NMZ5 311 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 RBFOX2O43251 390 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■□ 23
RERE-204ENST00000400908 DYNLT3P51808 116 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 TNXAQ16473 311 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 ST3GAL2Q16842 350 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 MUC20Q8N307 709 aaPredicted RBP12.34□□□□□ -0.43
RERE-204ENST00000400908 OR2Z1Q8NG97 314 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 ORAI1Q96D31 301 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 LOC389332A0A1B0GUA5 103 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 IGHV3-15A0A0B4J1V0 119 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 GNG7O60262 68 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 LGALS3P17931 250 aaKnown RBP12.34□□□□□ -0.43
RERE-204ENST00000400908 SRP14P37108 136 aaKnown RBP12.34□□□□□ -0.43
RERE-204ENST00000400908 LINC00052Q96N35 136 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 PDFQ9HBH1 243 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 COA4Q9NYJ1 87 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 MMP17Q9ULZ9 603 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 DAPP1Q9UN19 280 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 TAPBPO15533 448 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 ICOSLGO75144 302 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 NPPBP16860 134 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 HERPUD1Q15011 391 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 JMJD6Q6NYC1 403 aaPredicted RBP12.34□□□□□ -0.43
RERE-204ENST00000400908 PARM1Q6UWI2 310 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 CBLN2Q8IUK8 224 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 QSER1Q2KHR3 1735 aa12.34□□□□□ -0.43
RERE-204ENST00000400908 C7orf77A4D0Y5 90 aa12.33□□□□□ -0.43
RERE-204ENST00000400908 ARRDC5A6NEK1 342 aa12.33□□□□□ -0.43
RERE-204ENST00000400908 DAOP14920 347 aa12.33□□□□□ -0.43
RERE-204ENST00000400908 PPICP45877 212 aa12.33□□□□□ -0.43
RERE-204ENST00000400908 OR3A4PP47883 348 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms