RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ELOA3CA0A087WX78 387 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 ZNF726A6NNF4 738 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 TMEM14DPA8MWL7 114 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 A8MWP6 167 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 AQP7O14520 342 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 TAAR5O14804 337 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 MAS1P04201 325 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 MMP7P09237 267 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 OR8U9P0C7N5 309 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 RAB4AP20338 218 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 MSR1P21757 451 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 CYB561P49447 251 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 RPS23P62266 143 aaKnown RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 IL13RA1P78552 427 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 MEF2DQ14814 521 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 OR8B8Q15620 311 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 RSPO1Q2MKA7 263 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 TMEM225Q6GV28 225 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 EIF5AL1Q6IS14 154 aaKnown RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 PRR22Q8IZ63 422 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 OR8U1Q8NH10 309 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 DOK4Q8TEW6 326 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 PP6455Q8WZ26 134 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 C11orf40Q8WZ69 217 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 AQP3Q92482 292 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 PRRT1Q99946 306 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 METTL9Q9H1A3 318 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 KLRF1Q9NZS2 232 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 KLK13Q9UKR3 277 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 MPDZO75970 2070 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 LOC101059948A0A1B0GTJ6 334 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 A4D1N5 150 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 ZNF736B4DX44 427 aaPredicted RBP4.65□□□□□ -1.66
VPS41-203ENST00000395969 EEF1E1-BLOC1S5C9J1V9 151 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 ADAP1O75689 374 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 TTRP02766 147 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 P04436 131 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 NPSP0C0P6 89 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 SERPINF1P36955 418 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 EIF5AP63241 154 aaKnown RBP4.65□□□□□ -1.66
VPS41-203ENST00000395969 NHLH2Q02577 135 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 TRIP6Q15654 476 aaKnown RBP4.65□□□□□ -1.66
VPS41-203ENST00000395969 OR2A2Q6IF42 318 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 DOK3Q7L591 496 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 LRRC18Q8N456 261 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 OR51L1Q8NGJ5 315 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 NPRL2Q8WTW4 380 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 FAM3DQ96BQ1 224 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 MUCL1Q96DR8 90 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 C1QTNF5Q9BXJ0 243 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 TAF9BQ9HBM6 251 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 ZNF160Q9HCG1 818 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 FSCN3Q9NQT6 498 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 DEPPQ9NTK1 212 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 TMEM38BQ9NVV0 291 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 B4GALT7Q9UBV7 327 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 HHLA2Q9UM44 414 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 RP1P56715 2156 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 ARHGAP21Q5T5U3 1957 aa4.65□□□□□ -1.66
VPS41-203ENST00000395969 LOC102724200A0A096LPH7 203 aaPredicted RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 IGHV3-20A0A0C4DH32 117 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 A0A0J9YW62 118 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ZNF814B7Z6K7 855 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 OR6A2O95222 327 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 PTBP3O95758 552 aaKnown RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 CYB5AP00167 134 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 PNPP00491 289 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SP1P08047 785 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SOD3P08294 240 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 FABP4P15090 132 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SOX2P48431 317 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 PCBD1P61457 104 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 IL15RAQ13261 267 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ARL6IP1Q15041 203 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 NNATQ16517 81 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 KHDC3LQ587J8 217 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SPNS3Q6ZMD2 512 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 GJC3Q8NFK1 279 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 OR14K1Q8NGZ2 314 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SNIP1Q8TAD8 396 aaKnown RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 CD300LFQ8TDQ1 290 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 AMELYQ99218 206 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 NDUFAF3Q9BU61 184 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 KCNK15Q9H427 330 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SEPSECSQ9HD40 501 aaKnown RBP4.65□□□□□ -1.67
VPS41-203ENST00000395969 OR5AC2Q9NZP5 309 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 OR52A1Q9UKL2 312 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 IGKV1D-43A0A0B4J1Z2 117 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 OR5H15A6NDH6 313 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 MARCH11A6NNE9 402 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SLC16A7O60669 478 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BKO60814 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 SERPINA5P05154 406 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BJP06899 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HLA-DOBP13765 273 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BOP23527 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 HIST1H2BBP33778 126 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 ZNF84P51523 738 aa4.65□□□□□ -1.67
VPS41-203ENST00000395969 CLDN6P56747 220 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms