RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 WSB1Q9Y6I7 421 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 HRKO00198 91 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 NDUFS8O00217 210 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 NME4O00746 187 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 HSD17B1P14061 328 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 MGMTP16455 207 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 HCCSP53701 268 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 ACSM1Q08AH1 577 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 CNPY1Q3B7I2 92 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 DRAXINQ8NBI3 349 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 DYNC2LI1Q8TCX1 351 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 BCL2L2Q92843 193 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 MRPL24Q96A35 216 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 WFIKKN1Q96NZ8 548 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF2Q9BSG1 426 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 OR1A1Q9P1Q5 309 aa8.02□□□□□ -1.13
LIMCH1-202ENST00000381753 MCM3APO60318 1980 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 DNAJC13O75165 2243 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ARRDC5A6NEK1 342 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 GABRPO00591 440 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 KRASP01116 189 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF85Q03923 595 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 RPL7L1Q6DKI1 246 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 AMER3Q8N944 861 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 SGMS2Q8NHU3 365 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ASB10Q8WXI3 467 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ERGIC1Q969X5 290 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF385AQ96PM9 386 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 SH2D2AQ9NP31 389 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ADAP1O75689 374 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 IL18BPO95998 194 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ORM2P19652 201 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 FCGR2CP31995 323 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 GLRXP35754 106 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF137PP52743 207 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 DEFB113Q30KQ7 82 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ELP2Q6IA86 826 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 CYP4V2Q6ZWL3 525 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 OR1B1Q8NGR6 318 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 FER1L6Q2WGJ9 1857 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 PSMB11A5LHX3 300 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 MTNR1BP49286 362 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 SLC25A53Q5H9E4 307 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 C15orf54Q8N8G6 183 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF439Q8NDP4 499 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 OIT3Q8WWZ8 545 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 TMEM186Q96B77 213 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 SLC25A33Q9BSK2 321 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 OR2F2O95006 317 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 C2orf68Q2NKX9 166 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 OR10A7Q8NGE5 316 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 OR10J6PQ8NGY7 276 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 SSMEM1Q8WWF3 244 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 DPCDQ9BVM2 203 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 C12orf10Q9HB07 376 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 TAS2R5Q9NYW4 299 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 PCYT1BQ9Y5K3 369 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 ARFGEF1Q9Y6D6 1849 aa8.01□□□□□ -1.13
LIMCH1-202ENST00000381753 HIST1H1EP10412 219 aaKnown RBP8□□□□□ -1.13
LIMCH1-202ENST00000381753 IAPPP10997 89 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 LMO1P25800 156 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 ADAD2Q8NCV1 583 aaKnown RBP8□□□□□ -1.13
LIMCH1-202ENST00000381753 OR52N4Q8NGI2 321 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 TLNRD1Q9H1K6 362 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 ANKRD31Q8N7Z5 1873 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 TCHHQ07283 1943 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 RHBDL1O75783 438 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 RECKO95980 971 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 TPT1P13693 172 aaKnown RBP8□□□□□ -1.13
LIMCH1-202ENST00000381753 FOSL1P15407 271 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 MC5RP33032 325 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 OR2F1Q13607 317 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 PEA15Q15121 130 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF141Q15928 474 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 KLHDC8BQ8IXV7 354 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 STPG3Q8N7X2 389 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 OR8G5Q8NG78 346 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 OR1L4Q8NGR5 311 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 REG4Q9BYZ8 158 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 SIRT4Q9Y6E7 314 aaPredicted RBP8□□□□□ -1.13
LIMCH1-202ENST00000381753 A0A1B0GUL6 1792 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 SVILO95425 2214 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 IGHV3-21A0A0B4J1V1 117 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 GPR31O00270 319 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 CTRB1P17538 263 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 PEBP1P30086 187 aaKnown RBP8□□□□□ -1.13
LIMCH1-202ENST00000381753 LRRC75BQ2VPJ9 315 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 SOWAHCQ53LP3 525 aaPredicted RBP8□□□□□ -1.13
LIMCH1-202ENST00000381753 CTRB2Q6GPI1 263 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF738Q8NE65 137 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 OR1L6Q8NGR2 347 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 OR4A5Q8NH83 315 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 NPAP1Q9NZP6 1156 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 NUBP2Q9Y5Y2 271 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 SNURFLB1AK76 121 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 SEC14L6B5MCN3 397 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 FFAR1O14842 300 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 LALBAP00709 142 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 METTL15P1P0C7V9 234 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 MEOX2P50222 304 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms