RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NBASA2RRP1 2371 aa9□□□□□ -0.97
POLR2J3-201ENST00000379340 CNTRLQ7Z7A1 2325 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 IGKV1D-8A0A087WSZ0 117 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 NBPF19A0A087WUL8 3843 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 A0A1B0GW55 424 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 K7ENP7 123 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 BCL2L11O43521 198 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 GLAP06280 429 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DUX4L2P0CJ85 424 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DUX4L3P0CJ86 424 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DUX4L4P0CJ87 422 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DUX4L5P0CJ88 424 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DUX4L6P0CJ89 424 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DUX4L7P0CJ90 424 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 PET100P0DJ07 73 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 CCL2P13500 99 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 RPS2P15880 293 aaKnown RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 PSMB6P28072 239 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SERPINF1P36955 418 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 RBMXP38159 391 aaKnown RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 GLP1RP43220 463 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 HAAOP46952 286 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 UCNP55089 124 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 UCP3P55916 312 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 UBE2NP61088 152 aaKnown RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SUPT4H1P63272 117 aaKnown RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 PMP22Q01453 160 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 GUSBP1Q15486 140 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 HIKESHIQ53FT3 197 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 OR2A2Q6IF42 318 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 INO80CQ6PI98 192 aaPredicted RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 FAM214BQ7L5A3 538 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SGPP2Q8IWX5 399 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 C1orf162Q8NEQ5 155 aaPredicted RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 OR5P3Q8WZ94 311 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 WNT2BQ93097 391 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 PIK3IP1Q96FE7 263 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SEC22AQ96IW7 307 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 CITED4Q96RK1 184 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 HDHD3Q9BSH5 251 aaPredicted RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 PKIBQ9C010 78 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF442Q9H7R0 627 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SPACA1Q9HBV2 294 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 RCC2Q9P258 522 aaKnown RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DUX4Q9UBX2 424 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 FREM1Q5H8C1 2179 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF407Q9C0G0 2248 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 TRBV6-7A0A0A0MS04 114 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 CRYM-AS1A6NIL9 109 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF732B4DXR9 585 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 EEF1E1-BLOC1S5C9J1V9 151 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 OR7C1O76099 320 aaPredicted RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 NGFP01138 241 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 IFNA2P01563 188 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 RRASP10301 218 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SELEP16581 610 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 BCL3P20749 454 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 GLRA1P23415 457 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 WNT5AP41221 380 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 GPM6AP51674 278 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 GNG3P63215 75 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 IL13RA2Q14627 380 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SLC9A3R2Q15599 337 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 SLC22A25Q6T423 547 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 FBXW12Q6X9E4 464 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 Q6ZT83 130 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 INO80EQ8NBZ0 244 aaPredicted RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 ANGPTL6Q8NI99 470 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 GTF3AQ92664 365 aaKnown RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 PHYHIPLQ96FC7 376 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 C2orf50Q96LR7 162 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 TRIB1Q96RU8 372 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 RIMS4Q9H426 269 aaPredicted RBP8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 CDH20Q9HBT6 801 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 RDH8Q9NYR8 311 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 CSAG2Q9Y5P2 127 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 DNAJC13O75165 2243 aa8.99□□□□□ -0.97
POLR2J3-201ENST00000379340 BOD1L1Q8NFC6 3051 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 C13orf42A0A1B0GVH6 325 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 POM121CA8CG34 1229 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 AHRRA9YTQ3 701 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 MSTNO14793 375 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF728P0DKX0 622 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 LYL1P12980 280 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 ZNF14P17017 642 aaPredicted RBP8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 WT1P19544 449 aaPredicted RBP8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 TUBG1P23258 451 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 PTGER4P35408 488 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 NUP62P37198 522 aaPredicted RBP8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 IL24Q13007 206 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 BAMBIQ13145 260 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 SRSF6Q13247 344 aaKnown RBP8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 DEFB109BQ30KR1 87 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 ANKRD55Q3KP44 614 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 COMMD7Q86VX2 200 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 ZADH2Q8N4Q0 377 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 EXTL1Q92935 676 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 SLAMF9Q96A28 289 aa8.98□□□□□ -0.97
POLR2J3-201ENST00000379340 CYYR1Q96J86 154 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms