RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ASB10Q8WXI3 467 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 hADV38S2A0JD32 116 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 HS3ST1O14792 307 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 VSIG8P0DPA2 414 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 OR5AU1Q8NGC0 362 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 CMTM2Q8TAZ6 248 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 C20orf141Q9NUB4 165 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 ICOSLGO75144 302 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 MGAT2Q10469 447 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 Q5PR19 223 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 HLA-CQ95604 372 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 PRSS56P0CW18 603 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 NDFIP1Q9BT67 221 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 CCL26Q9Y258 94 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 HELTA6NFD8 242 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 HYAL1Q12794 435 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF506Q5JVG8 444 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 GAB2Q9UQC2 676 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF205O95201 554 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 SCGB1D1O95968 90 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 Q6ZSR3 168 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 FBXO4Q9UKT5 387 aa4.34□□□□□ -1.71
PCDH9-201ENST00000377861 BTLAQ7Z6A9 289 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 APCDD1LQ8NCL9 501 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 SPSB4Q96A44 273 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 UBE2CO00762 179 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 CNN1P51911 297 aaKnown RBP4.34□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF90Q03938 601 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 AARDQ4LEZ3 155 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 BCL2L2Q92843 193 aaPredicted RBP4.34□□□□□ -1.72
PCDH9-201ENST00000377861 OTX1P32242 354 aaPredicted RBP4.34□□□□□ -1.72
PCDH9-201ENST00000377861 DOLPP1Q86YN1 238 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 RNF175Q8N4F7 328 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 ZADH2Q8N4Q0 377 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 PRR19A6NJB7 356 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 RAB29O14966 203 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 GABRG2P18507 467 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 PRRX1P54821 245 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 MS4A10Q96PG2 267 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 A6NDN8 102 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 OR1A1Q9P1Q5 309 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 FOXD3Q9UJU5 478 aaPredicted RBP4.34□□□□□ -1.72
PCDH9-201ENST00000377861 TGFBR1P36897 503 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 NXPH1P58417 271 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 OR10C1Q96KK4 312 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 LTN1O94822 1766 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 LOC100509620A0A075B734 347 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 CXCL3P19876 107 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 SAPCD1Q5SSQ6 148 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 ADGRG7Q96K78 797 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 SDHCQ99643 169 aaPredicted RBP4.34□□□□□ -1.72
PCDH9-201ENST00000377861 C1QTNF5Q9BXJ0 243 aa4.34□□□□□ -1.72
PCDH9-201ENST00000377861 MARCH1Q8TCQ1 289 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 C1RLQ9NZP8 487 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 AADACL3Q5VUY0 350 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 LYPD1Q8N2G4 141 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ATXN7L1Q9ULK2 861 aaPredicted RBP4.33□□□□□ -1.72
PCDH9-201ENST00000377861 CST9LP1Q5W188 147 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 FAM24AA6NFZ4 105 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 LAMTOR1Q6IAA8 161 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 REPIN1Q9BWE0 567 aaKnown RBP4.33□□□□□ -1.72
PCDH9-201ENST00000377861 MDFIC2A0A1B0GVS7 189 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TAS2R60P59551 318 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 GNG12Q9UBI6 72 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 IGKV3D-15A0A087WSY6 115 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 PCP4L1A6NKN8 68 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 K7ESM1 405 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 BCL2P10415 239 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 OR2T2Q6IF00 324 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 IL20RBQ6UXL0 311 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 THSD4Q6ZMP0 1018 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 COMTD1Q86VU5 262 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 Q6ZPB1 254 aaPredicted RBP4.33□□□□□ -1.72
PCDH9-201ENST00000377861 SORBS1Q9BX66 1292 aaKnown RBP4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ODAMA1E959 279 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 SCGB1D2O95969 90 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 HPXP02790 462 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 LINC00869P0C866 280 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 SLC35G3Q8N808 338 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ADIPOR1Q96A54 375 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 NARFLQ9H6Q4 476 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 K7EMI3 77 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 LINC01590Q5TEZ4 76 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 WNT2BQ93097 391 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 IGHV1OR21-1A0A087WYE8 117 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM235A6NFC5 223 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 GAS1P54826 345 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 PRSS45Q7RTY3 260 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 OR10G7Q8NGN6 311 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 GPR82Q96P67 336 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 OR14J1Q9UGF5 321 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 MAST2Q6P0Q8 1798 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 C4BP0C0L5 1744 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 DBX1A6NMT0 343 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 HOXC5Q00444 222 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ELOBQ15370 118 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 NOXO1Q8NFA2 376 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 REEP6Q96HR9 211 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TMPRSS3P57727 454 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TEPPQ6URK8 271 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms