RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 RNF133Q8WVZ7 376 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ZMIZ1Q9ULJ6 1067 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 FUT9Q9Y231 359 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 DBX1A6NMT0 343 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ZNF25P17030 456 aaPredicted RBP14.05□□□□□ -0.16
COL17A1-202ENST00000369733 HOGA1Q86XE5 327 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 LILRB1Q8NHL6 650 aaPredicted RBP14.05□□□□□ -0.16
COL17A1-202ENST00000369733 GNRHR2Q96P88 292 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 SLC26A1Q9H2B4 701 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 FKBP11Q9NYL4 201 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 NKX2-6A6NCS4 301 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 GNG4P50150 75 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ATP6V1FQ16864 119 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 TRIB1Q96RU8 372 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 TAAR3PQ9P1P4 343 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ZNF835Q9Y2P0 537 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 SCN4AP35499 1836 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 A0A0B4J293 547 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 SYNGR2O43760 224 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 CELA2BP08218 269 aaPredicted RBP14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ACAA1P09110 424 aaPredicted RBP14.05□□□□□ -0.16
COL17A1-202ENST00000369733 HLA-GP17693 338 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 PEBP1P30086 187 aaKnown RBP14.05□□□□□ -0.16
COL17A1-202ENST00000369733 FCER1GP30273 86 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 ANKRD37Q7Z713 158 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 TMEM9BQ9NQ34 198 aa14.05□□□□□ -0.16
COL17A1-202ENST00000369733 EIF3GO75821 320 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL17A1-202ENST00000369733 CNIH1O95406 144 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 CYC1P08574 325 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 VDAC1P21796 283 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 ZNF880Q6PDB4 577 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 Q8IYB0 196 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 TMEM52Q8NDY8 209 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 J3QR89 54 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 NGFP01138 241 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 ATP6V0CP27449 155 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 CSN1S1P47710 185 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 PTTG1IPP53801 180 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 KCNK7Q9Y2U2 307 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 M0QZK8 103 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 GGCTO75223 188 aaKnown RBP14.04□□□□□ -0.16
COL17A1-202ENST00000369733 GPR3P46089 330 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 GNB1P62873 340 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 FZD5Q13467 585 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 SMIM21Q3B7S5 101 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 SPINK9Q5DT21 86 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 DEFB108BQ8NET1 73 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 OR51M1Q9H341 326 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 PPYP01298 95 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 GYPAP02724 150 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 CRISP2P16562 243 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 MMP16P51512 607 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 GAPTQ8N292 157 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 PLA2G2FQ9BZM2 168 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 ZNF355PQ9NSJ1 428 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
COL17A1-202ENST00000369733 LIPT2A6NK58 231 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 TRDCB7Z8K6 153 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 M0R1X1 148 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 TNFSF14O43557 240 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 USF1P22415 310 aaPredicted RBP14.04□□□□□ -0.16
COL17A1-202ENST00000369733 PABPC1L2AQ5JQF8 200 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 C19orf48Q6RUI8 117 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 GTF2H5Q6ZYL4 71 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 NPDC1Q9NQX5 325 aaPredicted RBP14.04□□□□□ -0.16
COL17A1-202ENST00000369733 HSF4Q9ULV5 492 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 DTX4Q9Y2E6 619 aa14.04□□□□□ -0.16
COL17A1-202ENST00000369733 KNL1Q8NG31 2342 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 PIN1P1O15428 100 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 RRP8O43159 456 aaKnown RBP14.03□□□□□ -0.16
COL17A1-202ENST00000369733 HEXAP06865 529 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 OR10X1Q8NGY0 326 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 GPR27Q9NS67 375 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 CDS2O95674 445 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 IGKV1D-16P01601 117 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 ADH4P08319 380 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 SHISA3A0PJX4 238 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 OR2A4O95047 310 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 PATE4P0C8F1 98 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 ZP1P60852 638 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 MGAT2Q10469 447 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 Q6ZN92 141 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 ACY3Q96HD9 319 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 OR2A7Q96R45 310 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 LOC102723971A0A1B0GUV8 181 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 EML2O95834 649 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 GAPDHP04406 335 aaKnown RBP14.03□□□□□ -0.16
COL17A1-202ENST00000369733 MDH2P40926 338 aaKnown RBP14.03□□□□□ -0.16
COL17A1-202ENST00000369733 WIPI1Q5MNZ9 446 aaPredicted RBP14.03□□□□□ -0.16
COL17A1-202ENST00000369733 PLPPR2Q96GM1 343 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 BET1LQ9NYM9 111 aa14.03□□□□□ -0.16
COL17A1-202ENST00000369733 YTHDF2Q9Y5A9 579 aaKnown RBP14.03□□□□□ -0.16
COL17A1-202ENST00000369733 C11orf94C9JXX5 98 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 TOX3O15405 576 aaPredicted RBP14.02□□□□□ -0.16
COL17A1-202ENST00000369733 LINC01565O15544 149 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 RECKO95980 971 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 FSTP19883 344 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 OR10J1P30954 320 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 AMTP48728 403 aa14.02□□□□□ -0.16
COL17A1-202ENST00000369733 ZNRF4Q8WWF5 429 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms