RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ASPHD2Q6ICH7 369 aa15.22■□□□□ 0.03
CHTOP-202ENST00000368687 OR13C5Q8NGS8 318 aa15.22■□□□□ 0.03
CHTOP-202ENST00000368687 FAM216AQ8WUB2 273 aa15.22■□□□□ 0.03
CHTOP-202ENST00000368687 DERL3Q96Q80 235 aa15.22■□□□□ 0.03
CHTOP-202ENST00000368687 CCDC90BQ9GZT6 254 aa15.22■□□□□ 0.03
CHTOP-202ENST00000368687 ELL3Q9HB65 397 aaPredicted RBP15.22■□□□□ 0.03
CHTOP-202ENST00000368687 GSTK1Q9Y2Q3 226 aa15.22■□□□□ 0.03
CHTOP-202ENST00000368687 hADV38S2A0JD32 116 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 MEGF11A6BM72 1044 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 VENTXO95231 258 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 CSN2P05814 226 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 LMO1P25800 156 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 ERP29P30040 261 aaKnown RBP15.21■□□□□ 0.03
CHTOP-202ENST00000368687 TGFBR2P37173 567 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 GABARAPL2P60520 117 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 IL13RA2Q14627 380 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 TBCEQ15813 527 aaPredicted RBP15.21■□□□□ 0.03
CHTOP-202ENST00000368687 GRK1Q15835 563 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 CRIP3Q6Q6R5 217 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 ASCL4Q6XD76 172 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 BRD3OSQ6XYD6 125 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 SIGLECL1Q8N7X8 197 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 Q8NFD4 153 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 METTL9Q9H1A3 318 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 PRDM13Q9H4Q3 707 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 C19orf12Q9NSK7 152 aa15.21■□□□□ 0.03
CHTOP-202ENST00000368687 IGHV3OR16-10A0A075B7F0 116 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 DENRO43583 198 aaKnown RBP15.2■□□□□ 0.02
CHTOP-202ENST00000368687 OR2H2O95918 312 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 CSTBP04080 98 aaKnown RBP15.2■□□□□ 0.02
CHTOP-202ENST00000368687 UBE2E1P51965 193 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 EDDM3BP56851 147 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 MLLT11Q13015 90 aaPredicted RBP15.2■□□□□ 0.02
CHTOP-202ENST00000368687 BAMBIQ13145 260 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 TMEM200BQ69YZ2 307 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 C17orf107Q6ZR85 190 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 LINC00596Q86U02 117 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 Q8N7P7 452 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 OR51T1Q8NGJ9 327 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 ZDHHC16Q969W1 377 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 SLC25A28Q96A46 364 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 OR5M11Q96RB7 305 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 C19orf24Q9BVV8 132 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 YTHDF1Q9BYJ9 559 aaKnown RBP15.2■□□□□ 0.02
CHTOP-202ENST00000368687 HEXA-AS1Q9H8Q6 139 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 SIRT7Q9NRC8 400 aa15.2■□□□□ 0.02
CHTOP-202ENST00000368687 SF3B6Q9Y3B4 125 aaKnown RBP15.2■□□□□ 0.02
CHTOP-202ENST00000368687 ZNF44P15621 663 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 ERVFRD-1P60508 538 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 TPBGQ13641 420 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 NHLRC3Q5JS37 347 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 BCL6BQ8N143 479 aaPredicted RBP15.19■□□□□ 0.02
CHTOP-202ENST00000368687 TMEM86BQ8N661 226 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 PHYHIPQ92561 330 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 UQCC2Q9BRT2 126 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 IL36RNQ9UBH0 155 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 FAM96BQ9Y3D0 163 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 LINC00312Q9Y6C7 94 aa15.19■□□□□ 0.02
CHTOP-202ENST00000368687 TMEM82A0PJX8 343 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 DEGS1O15121 323 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 RGS9O75916 674 aaPredicted RBP15.18■□□□□ 0.02
CHTOP-202ENST00000368687 ZNF728P0DKX0 622 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 DUSP1P28562 367 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 RANBP1P43487 201 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 OR3A4PP47883 348 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 KCNJ3P48549 501 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 SNU13P55769 128 aaKnown RBP15.18■□□□□ 0.02
CHTOP-202ENST00000368687 UBA52P62987 128 aaKnown RBP15.18■□□□□ 0.02
CHTOP-202ENST00000368687 MIDNQ504T8 468 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 ACSM3Q53FZ2 586 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 ZNF367Q7RTV3 350 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 SVOPQ8N4V2 548 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 JAGN1Q8N5M9 183 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 ZDHHC22Q8N966 263 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 OR4M1Q8NGD0 313 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 TNFRSF14Q92956 283 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 FOXRED1Q96CU9 486 aaPredicted RBP15.18■□□□□ 0.02
CHTOP-202ENST00000368687 MRPS24Q96EL2 167 aaKnown RBP15.18■□□□□ 0.02
CHTOP-202ENST00000368687 ZNF714Q96N38 554 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 TMED9Q9BVK6 235 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 SLITRK2Q9H156 845 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 TCF7L1Q9HCS4 588 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 UBE2J1Q9Y385 318 aaPredicted RBP15.18■□□□□ 0.02
CHTOP-202ENST00000368687 POMT1Q9Y6A1 747 aa15.18■□□□□ 0.02
CHTOP-202ENST00000368687 TRAV8-7A0A075B6U6 113 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 DNAJC9-AS1A6NH13 148 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 RNASEK-C17orf49H0YIS7 233 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 SIRPB1O00241 398 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 PSPNO60542 156 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 FBP1P09467 338 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 HSMCR30P0CW71 290 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 GTF2F2P13984 249 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 CPEP16870 476 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 OR3A1P47881 315 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 P2RX3P56373 397 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 EDDM3AQ14507 147 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 LIPKQ5VXJ0 399 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 UNQ9370/PRO34162Q6UXP9 181 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 RNF144BQ7Z419 303 aa15.17■□□□□ 0.02
CHTOP-202ENST00000368687 OSR2Q8N2R0 312 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms