RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 PRSS44E7EML9 344 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 RAB29O14966 203 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 FAM20BO75063 409 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 HLA-DQA2P01906 255 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 CHRNB4P30926 498 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 GUCA1AP43080 201 aaPredicted RBP4.39□□□□□ -1.71
VCAM1-202ENST00000347652 TPTEP56180 551 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 LSM6P62312 80 aaKnown RBP4.39□□□□□ -1.71
VCAM1-202ENST00000347652 TFF3Q07654 80 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 RAB40BQ12829 278 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 P2RY6Q15077 328 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 AWAT1Q58HT5 328 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 C9orf135Q5VTT2 229 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 OTPQ5XKR4 325 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 Q6ZSR3 168 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 PGAP1Q75T13 922 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 SLC22A24Q8N4F4 322 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 OR4F15Q8NGB8 312 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 OR1K1Q8NGR3 316 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 ZNF503Q96F45 646 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 CNN2Q99439 309 aaKnown RBP4.39□□□□□ -1.71
VCAM1-202ENST00000347652 RHNO1Q9BSD3 238 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 DUSP21Q9H596 190 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 CYSLTR2Q9NS75 346 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 PAK1IP1Q9NWT1 392 aaPredicted RBP4.39□□□□□ -1.71
VCAM1-202ENST00000347652 SCN3BQ9NY72 215 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 MIOXQ9UGB7 285 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 POLDIP2Q9Y2S7 368 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 TPRKBQ9Y3C4 175 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 TIMM10BQ9Y5J6 103 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 POLQO75417 2590 aa4.39□□□□□ -1.71
VCAM1-202ENST00000347652 IRGMA1A4Y4 181 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 EFCAB10A6NFE3 127 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 LRRC30A6NM36 301 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ZNF593O00488 134 aaPredicted RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ADRA2AP08913 450 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 MRPL3P09001 348 aaKnown RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 CST2P09228 141 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ZNF823P16415 610 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 GATA3P23771 443 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 MAS1LP35410 378 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 HCCSP53701 268 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 GABARAPL2P60520 117 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SLC35A2P78381 396 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 TPBGQ13641 420 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ENDOGQ14249 297 aaKnown RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SLC25A35Q3KQZ1 300 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 HACD4Q5VWC8 232 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SHFQ7M4L6 423 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 H2BFWTQ7Z2G1 175 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 CDC20BQ86Y33 519 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ERI1Q8IV48 349 aaKnown RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SKA3Q8IX90 412 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 KLHDC1Q8N7A1 406 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 THAP8Q8NA92 274 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 TMEM80Q96HE8 168 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 YIPF3Q9GZM5 350 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 RETNQ9HD89 108 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SLC17A5Q9NRA2 495 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ZNF224Q9NZL3 707 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 NPAP1Q9NZP6 1156 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 KCNG2Q9UJ96 466 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 DIMT1Q9UNQ2 313 aaKnown RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 MYRFQ9Y2G1 1151 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 AKAP9Q99996 3911 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 NOTCH2Q04721 2471 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 EEF1E1-BLOC1S5C9J1V9 151 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 F8W735 103 aaPredicted RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 MLNRO43193 412 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 EEF1E1O43324 174 aaKnown RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 LYZL6O75951 148 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 RAB36O95755 333 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 IGHA1P01876 353 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 CDK1P06493 297 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 PSMB1P20618 241 aaKnown RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ERVK11-1P61568 191 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 HIST1H3AP68431 136 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 PITPNAQ00169 270 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 TGFBR3Q03167 851 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SLC3A1Q07837 685 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 ST3GAL4Q11206 333 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 FBXL19-AS1Q494R0 122 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 UTF1Q5T230 341 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 HIST2H3PS2Q5TEC6 136 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SLC18B1Q6NT16 456 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 STAC2Q6ZMT1 411 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 HIST2H3AQ71DI3 136 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 TGIF2LXQ8IUE1 241 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SLC35F2Q8IXU6 374 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 LRRC18Q8N456 261 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 OR2T27Q8NH04 317 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 OTOSQ8NHW6 89 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 FAM222BQ8WU58 562 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SMAP2Q8WU79 429 aaPredicted RBP4.38□□□□□ -1.71
VCAM1-202ENST00000347652 SSMEM1Q8WWF3 244 aa4.38□□□□□ -1.71
VCAM1-202ENST00000347652 BAALCQ8WXS3 180 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms