RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MRPL48Q96GC5 212 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 KCTD7Q96MP8 289 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SLIRPQ9GZT3 109 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR51V1Q9H2C8 321 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 WDR54Q9H977 334 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 BABAM2Q9NXR7 383 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 EHFQ9NZC4 300 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 CCDC59Q9P031 241 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ATPIF1Q9UII2 106 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 AK6Q9Y3D8 172 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 IER3IP1Q9Y5U9 82 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 U3KQA8 63 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 LAMA3Q16787 3333 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 METTL15A6NJ78 407 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 C12orf71A8MTZ7 269 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 C9J4A7 227 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 D6RAR5 112 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF670-ZNF695F2Z2N8 137 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 NBR2O15453 112 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 FADS1O60427 444 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CTAG2O75638 210 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 HLA-DPB1P04440 258 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CD55P08174 381 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ADRA2AP08913 450 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 FOLR2P14207 255 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 PRKACBP22694 351 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CD40LGP29965 261 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 FGF9P31371 208 aaPredicted RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CRYBB2P43320 205 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 POLR2HP52434 150 aaKnown RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 BLVRAP53004 296 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TAS2R43P59537 309 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF117Q03924 483 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ZFP36L1Q07352 338 aaKnown RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TRAM1Q15629 374 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 AANATQ16613 207 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 RGS21Q2M5E4 152 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 Q3ZCU0 254 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 OR2G6Q5TZ20 316 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TMEM205Q6UW68 189 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 C5orf46Q6UWT4 87 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TMUB2Q71RG4 321 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 COX15Q7KZN9 410 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TMEM105Q8N8V8 129 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 BBS1Q8NFJ9 593 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 OR10H4Q8NGA5 316 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 OR4K13Q8NH42 304 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 OR5W2Q8NH69 310 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CEP19Q96LK0 163 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 OR5B2Q96R09 309 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 DEFB126Q9BYW3 111 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 C6orf62Q9GZU0 229 aaPredicted RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 NXF2Q9GZY0 626 aaKnown RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 MCCC2Q9HCC0 563 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 POLE4Q9NR33 117 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF229Q9UJW7 825 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 KLK13Q9UKR3 277 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 MOKQ9UQ07 419 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 SPAG17Q6Q759 2223 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TP53BP1Q12888 1972 aaPredicted RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 PCDH15Q96QU1 1955 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 A0A075B6Q4 140 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TRAV36DV7A0A075B6V5 113 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TRBV11-1A0A0K0K1C0 115 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 HELTA6NFD8 242 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 J3QRE1 110 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 NDUFS8O00217 210 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 WWP2O00308 870 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TP53I11O14683 189 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 OR2T1O43869 369 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TIMM8AO60220 97 aaPredicted RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 RHBDL1O75783 438 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 KBTBD11O94819 623 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CD14P08571 375 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 HIST1H1CP16403 213 aaKnown RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CELP19835 753 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 BCL3P20749 454 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 F8A1P23610 371 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 BMI1P35226 326 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TGFBR1P36897 503 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 AQP2P41181 271 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 STARP49675 285 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ATP1B3P54709 279 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ACTA2P62736 377 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ERVK-25P63136 954 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ACTG2P63267 376 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 KRR1Q13601 381 aaKnown RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 SPANXN2Q5MJ10 180 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 FAHD2BQ6P2I3 314 aaPredicted RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF322Q6U7Q0 402 aaPredicted RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 GRINAQ7Z429 371 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 NANOGNBQ7Z5D8 188 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 FGFRL1Q8N441 504 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CYB561A3Q8NBI2 242 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 APCDD1LQ8NCL9 501 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 BEST4Q8NFU0 473 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 OR2T27Q8NH04 317 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 GPR119Q8TDV5 335 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 AP3S1Q92572 193 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms