RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 UFSP2Q9NUQ7 469 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 PLCE1Q9P212 2302 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 PLSCR5A0PG75 271 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 H3BUI4 141 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 NOS1APO75052 506 aaPredicted RBP19.35■□□□□ 0.69
PTX3-201ENST00000295927 NXPH2O95156 264 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 VSIG10L2P0DP72 767 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 SNTB1Q13884 538 aaKnown RBP19.35■□□□□ 0.69
PTX3-201ENST00000295927 CDSNQ15517 529 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 CHRFAM7AQ494W8 412 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 METTL11BQ5VVY1 283 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 SLC36A1Q7Z2H8 476 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 MRPL24Q96A35 216 aaKnown RBP19.35■□□□□ 0.69
PTX3-201ENST00000295927 SEC22CQ9BRL7 303 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 MED28Q9H204 178 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 SPACA1Q9HBV2 294 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 C12orf4Q9NQ89 552 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 ACACBO00763 2458 aa19.35■□□□□ 0.69
PTX3-201ENST00000295927 IL5P05113 134 aa19.34■□□□□ 0.69
PTX3-201ENST00000295927 CD200P41217 278 aa19.34■□□□□ 0.69
PTX3-201ENST00000295927 WDR82Q6UXN9 313 aa19.34■□□□□ 0.69
PTX3-201ENST00000295927 ARRDC1Q8N5I2 433 aa19.34■□□□□ 0.69
PTX3-201ENST00000295927 SUMF2Q8NBJ7 301 aa19.34■□□□□ 0.69
PTX3-201ENST00000295927 ELMOD3Q96FG2 381 aa19.34■□□□□ 0.69
PTX3-201ENST00000295927 ATP23Q9Y6H3 246 aa19.34■□□□□ 0.69
PTX3-201ENST00000295927 TMEM82A0PJX8 343 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 OR2AT4A6NND4 320 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 MCRIP1C9JLW8 97 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 HSPB6O14558 160 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 Q6P435 159 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 MED30Q96HR3 178 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 IFT22Q9H7X7 185 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 HES4Q9HCC6 221 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 ANXA10Q9UJ72 324 aa19.33■□□□□ 0.69
PTX3-201ENST00000295927 ERRFI1Q9UJM3 462 aaPredicted RBP19.33■□□□□ 0.69
PTX3-201ENST00000295927 TRAV24A0A0B4J272 114 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 SDCBPO00560 298 aaPredicted RBP19.33■□□□□ 0.68
PTX3-201ENST00000295927 HS3ST1O14792 307 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 DEGS1O15121 323 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 GRNP28799 593 aaKnown RBP19.33■□□□□ 0.68
PTX3-201ENST00000295927 CD83Q01151 205 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 FCN2Q15485 313 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 ATPAF1Q5TC12 328 aaPredicted RBP19.33■□□□□ 0.68
PTX3-201ENST00000295927 Q6ZPA2 131 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 OVCH2Q7RTZ1 564 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 PPA2Q9H2U2 334 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 EHFQ9NZC4 300 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 ZNF221Q9UK13 617 aa19.33■□□□□ 0.68
PTX3-201ENST00000295927 SPRY3O43610 288 aa19.32■□□□□ 0.68
PTX3-201ENST00000295927 ARPC4P59998 168 aa19.32■□□□□ 0.68
PTX3-201ENST00000295927 TSPAN5P62079 268 aa19.32■□□□□ 0.68
PTX3-201ENST00000295927 ADAM5Q6NVV9 412 aa19.32■□□□□ 0.68
PTX3-201ENST00000295927 NEK7Q8TDX7 302 aa19.32■□□□□ 0.68
PTX3-201ENST00000295927 CA5BP1Q8WTZ4 195 aa19.32■□□□□ 0.68
PTX3-201ENST00000295927 RANGRFQ9HD47 186 aaPredicted RBP19.32■□□□□ 0.68
PTX3-201ENST00000295927 VSIG4Q9Y279 399 aa19.32■□□□□ 0.68
PTX3-201ENST00000295927 WNT9BO14905 357 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 PTBP3O95758 552 aaKnown RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 ZNF44P15621 663 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 ZNF146Q15072 292 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 CDK10Q15131 360 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 NCMAPQ5T1S8 102 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 CD276Q5ZPR3 534 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 TERB2Q8NHR7 220 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 LINC01560Q8TB33 94 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 RDH5Q92781 318 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 DPCDQ9BVM2 203 aaPredicted RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 ESRP2Q9H6T0 727 aaKnown RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 GPN1Q9HCN4 374 aaPredicted RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 CHMP1AQ9HD42 196 aaPredicted RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 C1orf123Q9NWV4 160 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 NDRG3Q9UGV2 375 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 DIDO1Q9BTC0 2240 aaKnown RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 EIF2B2P49770 351 aaKnown RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 ZNF81P51508 661 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 TMED4Q7Z7H5 227 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 TMEM17Q86X19 198 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 OR2V2Q96R30 315 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 ALX4Q9H161 411 aaPredicted RBP19.31■□□□□ 0.68
PTX3-201ENST00000295927 WDR13Q9H1Z4 485 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 ETAA1Q9NY74 926 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 ICE1Q9Y2F5 2266 aa19.31■□□□□ 0.68
PTX3-201ENST00000295927 hCG_1807616A0A1W2PRN6 198 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 SSNA1O43805 119 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 OR2H2O95918 312 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 NAPSAO96009 420 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 GLAP06280 429 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 HOXA4Q00056 320 aaPredicted RBP19.3■□□□□ 0.68
PTX3-201ENST00000295927 ADIPOQQ15848 244 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 SPRNQ5BIV9 151 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 SPIN3Q5JUX0 258 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 ZDHHC22Q8N966 263 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 OR52B4Q8NGK2 314 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 PRR7Q8TB68 274 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 CAPSLQ8WWF8 208 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 LRRC46Q96FV0 321 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 PLPPR2Q96GM1 343 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 MEGF10Q96KG7 1140 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 FYTTD1Q96QD9 318 aaKnown RBP19.3■□□□□ 0.68
PTX3-201ENST00000295927 FN3KRPQ9HA64 309 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms