RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 KMT2EQ8IZD2 1858 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 ZNF732B4DXR9 585 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 K7EPK0 472 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 LRP3O75074 770 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 DEDDO75618 318 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 DIRAS3O95661 229 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 IGFBP7Q16270 282 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 FAM71E2Q8N5Q1 922 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 EXTL1Q92935 676 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 TMEM231Q9H6L2 316 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 LDAHQ9H6V9 325 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 LILRA1O75019 489 aa15.77■□□□□ 0.12
SHKBP1-201ENST00000291842 TGIF1Q15583 401 aa15.77■□□□□ 0.12
SHKBP1-201ENST00000291842 CCDC36Q8IYA8 594 aa15.77■□□□□ 0.12
SHKBP1-201ENST00000291842 TAF9BQ9HBM6 251 aa15.77■□□□□ 0.12
SHKBP1-201ENST00000291842 PCDHB16Q9NRJ7 776 aa15.77■□□□□ 0.12
SHKBP1-201ENST00000291842 FBXO24O75426 580 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 ZNF273Q14593 569 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 TMEM211Q6ICI0 200 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 ZDHHC23Q8IYP9 409 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 APOBEC3DQ96AK3 386 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 HRH4Q9H3N8 390 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 MTCH1Q9NZJ7 389 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 GLS2Q9UI32 602 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 TUBD1Q9UJT1 453 aa15.77■□□□□ 0.11
SHKBP1-201ENST00000291842 ABCD4O14678 606 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 MBPP02686 304 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 GLP1RP43220 463 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 SMCO1Q147U7 214 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 GLYATL2Q8WU03 294 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 MOB3AQ96BX8 217 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 POM121L2Q96KW2 1035 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 ZNF488Q96MN9 340 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 GPHA2Q96T91 129 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 PRRX2Q99811 253 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 ATPIF1Q9UII2 106 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 ZNF724A8MTY0 619 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 BET1O15155 118 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 PHF1O43189 567 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 SYNGR1O43759 233 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 NME2P1O60361 137 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 NME2P22392 152 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 HERV-K104P61576 105 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 STK11Q15831 433 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 CEACAM21Q3KPI0 293 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 MEX3BQ6ZN04 569 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 BSCL2Q96G97 398 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 FBXL17Q9UF56 701 aa15.76■□□□□ 0.11
SHKBP1-201ENST00000291842 PCNX2A6NKB5 2137 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 ARGFXA6NJG6 315 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 PPYP01298 95 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 SLC10A1Q14973 349 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 TSC22D1Q15714 1073 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 MST1LQ2TV78 715 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 RNFT1Q5M7Z0 435 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 TMPRSS7Q7RTY8 843 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 MDS2Q8NDY4 140 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 OR52M1Q8NGK5 317 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 LHFPL5Q8TAF8 219 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 LPAR3Q9UBY5 353 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 KLF13Q9Y2Y9 288 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 TMEM218A2RU14 115 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 RAB19A4D1S5 217 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 FAM74A7A6NL05 159 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 KLRC4-KLRK1H3BQV0 150 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 SCTP09683 121 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 ADCYAP1P18509 176 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 TMEM33P57088 247 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 FAM74A3Q4VXF1 159 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 SPATA46Q5T0L3 261 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 OR4A4PQ8NGN8 299 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 NEK7Q8TDX7 302 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 ARL11Q969Q4 196 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 ERGIC1Q969X5 290 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 GALNT14Q96FL9 552 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 TP53RKQ96S44 253 aa15.75■□□□□ 0.11
SHKBP1-201ENST00000291842 CFAP47Q6ZTR5 3102 aa15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 GPR31O00270 319 aa15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 PLP2Q04941 152 aa15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 HAGHLQ6PII5 290 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 LIAT1Q6ZQX7 453 aa15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 MSI2Q96DH6 328 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 ADAT1Q9BUB4 502 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 AMDHD2Q9Y303 409 aa15.74■□□□□ 0.11
SHKBP1-201ENST00000291842 CD300LBA8K4G0 201 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 IL32P24001 234 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 ARR3P36575 388 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 WNT5AP41221 380 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 FGF12P61328 243 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 RNPS1Q15287 305 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 FER1L6-AS2Q96M78 137 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 PARP12Q9H0J9 701 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 PLA2G2EQ9NZK7 142 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 ARHGAP21Q5T5U3 1957 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 TRAPPC2LH3BP13 241 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 DNASE2O00115 360 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 LPAR6P43657 344 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 ID4P47928 161 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 GUCA2BQ16661 112 aa15.73■□□□□ 0.11
SHKBP1-201ENST00000291842 UQCC3Q6UW78 93 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms