RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 KNTC1P50748 2209 aa21.61■■□□□ 1.05
ROM1-201ENST00000278833 PQLC2LA1A4F0 135 aa21.61■■□□□ 1.05
ROM1-201ENST00000278833 SS18L1O75177 396 aaPredicted RBP21.61■■□□□ 1.05
ROM1-201ENST00000278833 FCGR2CP31995 323 aa21.61■■□□□ 1.05
ROM1-201ENST00000278833 OR2M7Q8NG81 312 aa21.61■■□□□ 1.05
ROM1-201ENST00000278833 MSI2Q96DH6 328 aaKnown RBP21.61■■□□□ 1.05
ROM1-201ENST00000278833 REPIN1Q9BWE0 567 aaKnown RBP21.61■■□□□ 1.05
ROM1-201ENST00000278833 B4GALT7Q9UBV7 327 aa21.61■■□□□ 1.05
ROM1-201ENST00000278833 WDFY3Q8IZQ1 3526 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 PLATP00750 562 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 OR5AC1P0C628 307 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 DHRS7BQ6IAN0 325 aaPredicted RBP21.6■■□□□ 1.05
ROM1-201ENST00000278833 BTNL8Q6UX41 500 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 LGI3Q8N145 548 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 CPEB3Q8NE35 698 aaKnown RBP21.6■■□□□ 1.05
ROM1-201ENST00000278833 PIGCQ92535 297 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 OR2S2Q9NQN1 319 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 UQCC1Q9NVA1 299 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 LRFN1Q9P244 771 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 ZNF587BE7ETH6 402 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 SIGLEC5O15389 551 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 MRPL33O75394 65 aaKnown RBP21.6■■□□□ 1.05
ROM1-201ENST00000278833 CLDN18P56856 261 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 IL13RA2Q14627 380 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 GPR157Q5UAW9 335 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 OR2A2Q6IF42 318 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 DHRS13Q6UX07 377 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 ZNF611Q8N823 705 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 NDRG3Q9UGV2 375 aa21.6■■□□□ 1.05
ROM1-201ENST00000278833 NEURL1O76050 574 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 GLAP06280 429 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 SRPXP78539 464 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 Q6ZPA2 131 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 RAB11FIP2Q7L804 512 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.59■■□□□ 1.05
ROM1-201ENST00000278833 TOMM40LQ969M1 308 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 MICU1Q9BPX6 476 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 OPA3Q9H6K4 179 aa21.59■■□□□ 1.05
ROM1-201ENST00000278833 RCC2Q9P258 522 aaKnown RBP21.59■■□□□ 1.05
ROM1-201ENST00000278833 ZNF724A8MTY0 619 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 GPR31O00270 319 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 NUPL2O15504 423 aaKnown RBP21.58■■□□□ 1.05
ROM1-201ENST00000278833 RND3P61587 244 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 NRIP2Q9BQI9 281 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 GPR87Q9BY21 358 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 RHOFQ9HBH0 211 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 TMED3Q9Y3Q3 217 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 SDK2Q58EX2 2172 aa21.58■■□□□ 1.05
ROM1-201ENST00000278833 F8W036 122 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 GPR137BO60478 399 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 SNAPINO95295 136 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 MBPP02686 304 aaPredicted RBP21.58■■□□□ 1.04
ROM1-201ENST00000278833 DUSP1P28562 367 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 LPAR6P43657 344 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 P2RY1P47900 373 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 F2RL1P55085 397 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 TMEM33P57088 247 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 GUCA2BQ16661 112 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 LDLRAD3Q86YD5 345 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 CALHM1Q8IU99 346 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 BOLLQ8N9W6 283 aaKnown RBP21.58■■□□□ 1.04
ROM1-201ENST00000278833 THOC3Q96J01 351 aaKnown RBP21.58■■□□□ 1.04
ROM1-201ENST00000278833 SLC7A10Q9NS82 523 aa21.58■■□□□ 1.04
ROM1-201ENST00000278833 FBXO9Q9UK97 447 aaPredicted RBP21.58■■□□□ 1.04
ROM1-201ENST00000278833 C21orf140B9A014 251 aa21.57■■□□□ 1.04
ROM1-201ENST00000278833 HERV-K104P61576 105 aa21.57■■□□□ 1.04
ROM1-201ENST00000278833 ARF1P84077 181 aaKnown RBP21.57■■□□□ 1.04
ROM1-201ENST00000278833 FLI1Q01543 452 aaPredicted RBP21.57■■□□□ 1.04
ROM1-201ENST00000278833 GLYATL2Q8WU03 294 aa21.57■■□□□ 1.04
ROM1-201ENST00000278833 DYRK2Q92630 601 aa21.57■■□□□ 1.04
ROM1-201ENST00000278833 ATP6V1G2-DDX39BF2Z307 99 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 MED6O75586 246 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 CD5P06127 495 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 RCC1P18754 421 aaPredicted RBP21.56■■□□□ 1.04
ROM1-201ENST00000278833 FGF12P61328 243 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 SRSF3P84103 164 aaKnown RBP21.56■■□□□ 1.04
ROM1-201ENST00000278833 MPV17LQ2QL34 196 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 COMMD1Q8N668 190 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 ABI3Q9P2A4 366 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 LSM5Q9Y4Y9 91 aaKnown RBP21.56■■□□□ 1.04
ROM1-201ENST00000278833 DOCK10Q96BY6 2186 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 FBXO24O75426 580 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 SEC11BP0C7V7 166 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 PRSS12P56730 875 aa21.56■■□□□ 1.04
ROM1-201ENST00000278833 C9orf172C9J069 976 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 NAPSAO96009 420 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 PPYP01298 95 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 HEXAP06865 529 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 SLC25A26Q70HW3 274 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 OR56B2PQ8NGI1 322 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 SLC39A7Q92504 469 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 GTF3AQ92664 365 aaKnown RBP21.55■■□□□ 1.04
ROM1-201ENST00000278833 APOBEC3DQ96AK3 386 aaPredicted RBP21.55■■□□□ 1.04
ROM1-201ENST00000278833 ABHD14BQ96IU4 210 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 GINS3Q9BRX5 216 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 TREM1Q9NP99 234 aa21.55■■□□□ 1.04
ROM1-201ENST00000278833 RTTNQ86VV8 2226 aa21.54■■□□□ 1.04
ROM1-201ENST00000278833 SYNGR4O95473 234 aa21.54■■□□□ 1.04
ROM1-201ENST00000278833 CDS2O95674 445 aa21.54■■□□□ 1.04
ROM1-201ENST00000278833 MUC1P15941 1255 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms