RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SPTA1P02549 2419 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 TRBV6-6A0A0A6YYG2 114 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 A0A0A6YYJ9 748 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 A0A0B4J293 547 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 KIR2DS1A0A191URI9 304 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 TMEM82A0PJX8 343 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 MEIS3P1A6NDR6 274 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 CEACAM18A8MTB9 384 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 GEMIN2O14893 280 aaKnown RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 SSNA1O43805 119 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 PTBP3O95758 552 aaKnown RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF735P0CB33 412 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ANXA3P12429 323 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 BCL3P20749 454 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 CALCRP30988 508 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 HRH1P35367 487 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 CFHR2P36980 270 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 MPV17P39210 176 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 KIR2DS4P43632 304 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 EIF2B2P49770 351 aaKnown RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 SEC61A1P61619 476 aaKnown RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 TSPAN5P62079 268 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 FAM27E3Q08E93 113 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF154Q13106 437 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 KIR2DS1Q14954 304 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF146Q15072 292 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ZFP69Q49AA0 526 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 PRR30Q53SZ7 412 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 FAM209AQ5JX71 171 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF626Q68DY1 528 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 C6orf201Q7Z4U5 140 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 SPICQ8N5J4 248 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 DRAXINQ8NBI3 349 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 POC1AQ8NBT0 407 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 TERB2Q8NHR7 220 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 RNASE6Q93091 150 aaKnown RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 C1QTNF6Q9BXI9 259 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 TINAGL1Q9GZM7 467 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 PPA2Q9H2U2 334 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ESRP2Q9H6T0 727 aaKnown RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 NECAP2Q9NVZ3 263 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 MTCH1Q9NZJ7 389 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 NDRG3Q9UGV2 375 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 FBXO9Q9UK97 447 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 ZDHHC8Q9ULC8 765 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 POLEQ07864 2286 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 IGF2RP11717 2491 aa8.29□□□□□ -1.08
PHGDH-215ENST00000641371 PRRC2CQ9Y520 2896 aaKnown RBP8.29□□□□□ -1.08
PHGDH-215ENST00000641371 MGAQ8IWI9 3026 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 PIGBOS1A0A0B4J2F0 54 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 IFNL4K9M1U5 179 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 M0QYG6 137 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 SH2D1BO14796 132 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 DIRAS3O95661 229 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 RLN1P04808 185 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 FCGR3AP08637 254 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 PRKACAP17612 351 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 FPR2P25090 351 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 GLP1RP43220 463 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 PRSS12P56730 875 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 ERVK11-1P61568 191 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 IKZF1Q13422 519 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 MPPED2Q15777 294 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 SMIM21Q3B7S5 101 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 PIGYQ3MUY2 71 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 SCGB2B2Q4G0G5 96 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 TMEM255AQ5JRV8 349 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 ATAD3CQ5T2N8 411 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 SIGIRRQ6IA17 410 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 LPCAT3Q6P1A2 487 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 OVCH2Q7RTZ1 564 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 GLCCI1Q86VQ1 547 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 GVQW1Q8N7I0 195 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 SCCPDHQ8NBX0 429 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 DVL3Q92997 716 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-215ENST00000641371 SLC6A7Q99884 636 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 NRIP2Q9BQI9 281 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 FGF23Q9GZV9 251 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-215ENST00000641371 RANBP3Q9H6Z4 567 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF701Q9NV72 531 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-215ENST00000641371 AK3Q9UIJ7 227 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 ANXA10Q9UJ72 324 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 BAHCC1Q9P281 2608 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 CELSR3Q9NYQ7 3312 aa8.28□□□□□ -1.08
PHGDH-215ENST00000641371 CFAP47Q6ZTR5 3102 aa8.27□□□□□ -1.08
PHGDH-215ENST00000641371 ESPL1Q14674 2120 aa8.27□□□□□ -1.08
PHGDH-215ENST00000641371 ACACBO00763 2458 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 SHANK1Q9Y566 2161 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 PYCARD-AS1I3L0S3 204 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 CCL21O00585 134 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 DEGS1O15121 323 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 SYNGR1O43759 233 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 NXPH2O95156 264 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 KNG1P01042 644 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 ADH4P08319 380 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 ERP29P30040 261 aaKnown RBP8.27□□□□□ -1.09
PHGDH-215ENST00000641371 CCKARP32238 428 aa8.27□□□□□ -1.09
PHGDH-215ENST00000641371 GATA4P43694 442 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms