RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 OR13C3Q8NGS6 347 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 APH1BQ8WW43 257 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 TRUB1Q8WWH5 349 aaKnown RBP13.25□□□□□ -0.29
COLCA2-207ENST00000639470 ALG8Q9BVK2 526 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 FAM234AQ9H0X4 552 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 MEGF9Q9H1U4 602 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 HEXA-AS1Q9H8Q6 139 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 S100A14Q9HCY8 104 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 ING3Q9NXR8 418 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 ORC6Q9Y5N6 252 aa13.25□□□□□ -0.29
COLCA2-207ENST00000639470 ODF3BA8MYP8 253 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 TGFBR2P37173 567 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 GDNFP39905 211 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 RBP2P50120 134 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 ALKBH1Q13686 389 aaKnown RBP13.24□□□□□ -0.29
COLCA2-207ENST00000639470 CNN3Q15417 329 aaKnown RBP13.24□□□□□ -0.29
COLCA2-207ENST00000639470 GRK1Q15835 563 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 TMEM244Q5VVB8 128 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 XAF1Q6GPH4 301 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 ZFP1Q6P2D0 407 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 GDPD3Q7L5L3 318 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 C1QL4Q86Z23 238 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 FAM58AQ8N1B3 248 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 LYG1Q8N1E2 194 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 RHOXF1Q8NHV9 184 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 FAM110DQ8TAY7 271 aaPredicted RBP13.24□□□□□ -0.29
COLCA2-207ENST00000639470 PP6455Q8WZ26 134 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 PDCD1LG2Q9BQ51 273 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 GSTK1Q9Y2Q3 226 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 WNK1Q9H4A3 2382 aa13.24□□□□□ -0.29
COLCA2-207ENST00000639470 TRBV2A0A0J9YWF9 115 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 FAM90A8PA6NJQ4 464 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 CLIC3O95833 236 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 SERPINA3P01011 423 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ISG15P05161 165 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 IGHV1-8P0DP01 117 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 GABRA5P31644 462 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 GTF2A1P52655 376 aaPredicted RBP13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ATP1B3P54709 279 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ACTC1P68032 377 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ACTA1P68133 377 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 PDZK1IP1Q13113 114 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 DYNC1I2Q13409 638 aaKnown RBP13.23□□□□□ -0.29
COLCA2-207ENST00000639470 GALEQ14376 348 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 FAM189A2Q15884 450 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 SSX2Q16385 188 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 Q6ZS46 218 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 UTS2BQ765I0 119 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ZNF676Q8N7Q3 588 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 OR52I1Q8NGK6 324 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 RGP1Q92546 391 aaPredicted RBP13.23□□□□□ -0.29
COLCA2-207ENST00000639470 SNX22Q96L94 193 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 OPALINQ96PE5 141 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ERVK13-1Q9NX77 482 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ZNF581Q9P0T4 197 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 VWFP04275 2813 aa13.23□□□□□ -0.29
COLCA2-207ENST00000639470 ZFPL1O95159 310 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 OR2H2O95918 312 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 EFNB2P52799 333 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 LGALS4P56470 323 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 IL18R1Q13478 541 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 PRAMEF5Q5TYX0 476 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 MEDAGQ5VYS4 303 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 ZNF626Q68DY1 528 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 DNAAF1Q8NEP3 725 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 OR51A2Q8NGJ7 313 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 ZNF714Q96N38 554 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 HMG20AQ9NP66 347 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 FAM118AQ9NWS6 357 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 HILPDAQ9Y5L2 63 aa13.22□□□□□ -0.29
COLCA2-207ENST00000639470 LOC100130705A0A1B0GUX0 176 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 M0QZ24 198 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 WBP4O75554 376 aaKnown RBP13.21□□□□□ -0.29
COLCA2-207ENST00000639470 BAG2O95816 211 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 GLIPR1P48060 266 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 CCR9P51686 369 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 ACTA2P62736 377 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 ACTG2P63267 376 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 SCN1BQ07699 218 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 ZBTB49Q6ZSB9 765 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 LHFPL2Q6ZUX7 228 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 KLHDC1Q8N7A1 406 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 CCDC54Q8NEL0 328 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 ORAI1Q96D31 301 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 C9orf16Q9BUW7 83 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 ZNF702PQ9H963 129 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 NEK6Q9HC98 313 aa13.21□□□□□ -0.29
COLCA2-207ENST00000639470 SIRT4Q9Y6E7 314 aaPredicted RBP13.21□□□□□ -0.29
COLCA2-207ENST00000639470 A0A1W2PPH5 198 aa13.2□□□□□ -0.3
COLCA2-207ENST00000639470 HSPB6O14558 160 aa13.2□□□□□ -0.3
COLCA2-207ENST00000639470 LIMS3P0CW19 117 aa13.2□□□□□ -0.3
COLCA2-207ENST00000639470 LIMS4P0CW20 117 aa13.2□□□□□ -0.3
COLCA2-207ENST00000639470 VSIG10L2P0DP72 767 aa13.2□□□□□ -0.3
COLCA2-207ENST00000639470 PRKACBP22694 351 aa13.2□□□□□ -0.3
COLCA2-207ENST00000639470 CD24P25063 80 aa13.2□□□□□ -0.3
COLCA2-207ENST00000639470 SOX2P48431 317 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms