RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RIGQ13278 110 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 MOGQ16653 247 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 TBC1D28Q2M2D7 210 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 CHRFAM7AQ494W8 412 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZBED5Q49AG3 693 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ARMCX4Q5H9R4 360 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 PABPC1L2AQ5JQF8 200 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SAMD4BQ5PRF9 694 aaKnown RBP2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 CYB5R2Q6BCY4 276 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF774Q6NX45 483 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 PODNL1Q6PEZ8 512 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF841Q6ZN19 808 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 OAFQ86UD1 273 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 CYP4Z1Q86W10 505 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SVOPLQ8N434 492 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SYT14Q8NB59 555 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC30A7Q8NEW0 376 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR4K5Q8NGD3 323 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 C11orf40Q8WZ69 217 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 RDH5Q92781 318 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 C11orf52Q96A22 123 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 PYURFQ96I23 114 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ATF6BQ99941 703 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SH3GL3Q99963 347 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF416Q9BWM5 594 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 MRPL37Q9BZE1 423 aaKnown RBP2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 BPESC1Q9GZL8 116 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 NDEL1Q9GZM8 345 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 POLE4Q9NR33 117 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLCO1C1Q9NYB5 712 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ATPIF1Q9UII2 106 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 KLHL21Q9UJP4 597 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 SIGLEC7Q9Y286 467 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 ARL2BPQ9Y2Y0 163 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 FAM32AQ9Y421 112 aaKnown RBP2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 TIMM10BQ9Y5J6 103 aa2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 FBN1P35555 2871 aaKnown RBP2.83□□□□□ -1.96
CKS1BP3-201ENST00000600888 TRAV27A0A087WT01 109 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 SH3PXD2BA1X283 911 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 PRSS37A4D1T9 235 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 C12orf71A8MTZ7 269 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 SRRM5B3KS81 715 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 B4DSR2 109 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 XKRYO14609 159 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ST8SIA3O43173 380 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 SRSF10O75494 262 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GMNNO75496 209 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 RP2O75695 350 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GADD45GO95257 159 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC2A10O95528 541 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 CD55P08174 381 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ADRA2AP08913 450 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 NCK1P16333 377 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 LAP3P28838 519 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 CRABP1P29762 137 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 APLNRP35414 380 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 RPL4P36578 427 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 CRYBB2P43320 205 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 MAGEA2P43356 314 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GPR4P46093 362 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 YAP1P46937 504 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GSSP48637 474 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GDI2P50395 445 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 NDUFV3P56181 108 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 KLF3P57682 345 aaPredicted RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 FXYD6P3P58550 94 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ERVK-25P63136 954 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GNGT1P63211 74 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 HIST1H3AP68431 136 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 HSF2Q03933 536 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 FMODQ06828 376 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 SCRN3Q0VDG4 424 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 AQP6Q13520 282 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 KRR1Q13601 381 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ENDOGQ14249 297 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GGTLC2Q14390 218 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 GK3PQ14409 553 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 SGCAQ16586 387 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 MESTQ5EB52 335 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 HIST2H3PS2Q5TEC6 136 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 RPL13AP3Q6NVV1 102 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 C1orf94Q6P1W5 598 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 TBPL2Q6SJ96 375 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 SMARCD3Q6STE5 483 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ARL9Q6T311 187 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF730Q6ZMV8 503 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 DPY19L2P2Q6ZN68 376 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 C17orf107Q6ZR85 190 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 RFPL4BQ6ZWI9 263 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 HIST2H3AQ71DI3 136 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ADCK1Q86TW2 530 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 LRP11Q86VZ4 500 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF101Q8IZC7 436 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZCCHC24Q8N2G6 241 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 LRRC18Q8N456 261 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 LINC00471Q8N535 108 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 NHLRC2Q8NBF2 726 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 UXS1Q8NBZ7 420 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR13C2Q8NGS9 318 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR51A7Q8NH64 312 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms