RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 OR4C45A6NMZ5 311 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 H3BSH0 61 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 OGG1O15527 345 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 GNALP38405 381 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 GMFBP60983 142 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 ACSM1Q08AH1 577 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 RIPPLY1Q0D2K3 151 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 CDK5R1Q15078 307 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 TBCEQ15813 527 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 XAF1Q6GPH4 301 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 RDH10Q8IZV5 341 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 SPARTQ8N0X7 666 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 ZFP41Q8N8Y5 198 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 ZNF485Q8NCK3 441 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 H1FXQ92522 213 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 C12orf43Q96C57 262 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 OR5M11Q96RB7 305 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 PLEKHA1Q9HB21 404 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 SNTG1Q9NSN8 517 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 HHLA2Q9UM44 414 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 MAB21L2Q9Y586 359 aa13.38□□□□□ -0.27
SHKBP1-215ENST00000597649 A0A1B0GTI1 187 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 PNMA8CA0A1B0GUJ8 204 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 LOC107986453A0A1B0GWG9 222 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 CDIPTO14735 213 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 DHRS3O75911 302 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 ZFPL1O95159 310 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 LALBAP00709 142 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 ISG15P05161 165 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 CELP19835 753 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 BDH1Q02338 343 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 EMX1Q04741 257 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 DGUOKQ16854 277 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 NSUN5P1Q3KNT7 163 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 LRRC10Q5BKY1 277 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 ZNF367Q7RTV3 350 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 TSPAN14Q8NG11 270 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 SMIM19Q96E16 107 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 GAFA1Q96PS6 74 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 PDCD1LG2Q9BQ51 273 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 TLNRD1Q9H1K6 362 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 MMP28Q9H239 520 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 ACOT13Q9NPJ3 140 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 NECAP2Q9NVZ3 263 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 PIGLQ9Y2B2 252 aa13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 LSM2Q9Y333 95 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-215ENST00000597649 A0A087WXM4 84 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 M0R1W7 72 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 CHST1O43916 411 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 IGLV3-1P01715 115 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 VSIG10L2P0DP72 767 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 CCL1P22362 96 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 C11orf88Q6PI97 169 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 ZNF788Q6ZQV5 615 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 OR4C13Q8NGP0 309 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 OR13C3Q8NGS6 347 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 PIFOQ8TCI5 191 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 TSEN15Q8WW01 171 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 PIGCQ92535 297 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 FCGR1BQ92637 280 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 GHSRQ92847 366 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 UFD1Q92890 307 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 HIST1H2AAQ96QV6 131 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 PAPOLGQ9BWT3 736 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 MEGF9Q9H1U4 602 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 METTL8Q9H825 291 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 ISYNA1Q9NPH2 558 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 ENPP5Q9UJA9 477 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 RHBDD3Q9Y3P4 386 aa13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 SIRT4Q9Y6E7 314 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-215ENST00000597649 ADARB2-AS1A8MUL3 147 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 CD28P10747 220 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 ZNF20P17024 532 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 ZBTB37Q5TC79 503 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 NCR3LG1Q68D85 454 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 DMKNQ6E0U4 476 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 OR14K1Q8NGZ2 314 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 OR2T6Q8NHC8 308 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 ANGPTL6Q8NI99 470 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 GPR148Q8TDV2 347 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 PHF21AQ96BD5 680 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 MGLLQ99685 303 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 FGF23Q9GZV9 251 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 ABCB9Q9NP78 766 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 SLC25A10Q9UBX3 287 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 DHDHQ9UQ10 334 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 V9GYS6 101 aa13.35□□□□□ -0.27
SHKBP1-215ENST00000597649 ANXA2P2A6NMY6 339 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 DHRS7CA6NNS2 312 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 ZNF850A8MQ14 1090 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 SERPINA3P01011 423 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 CST4P01036 141 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 FAHP16930 419 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 ACKR3P25106 362 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 PSMB9P28065 219 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 MLLT11Q13015 90 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 HABP2Q14520 560 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 LRRC75BQ2VPJ9 315 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 RPL3LQ92901 407 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms