RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHMP2A-202ENST00000596708 CLN6Q9NWW5 311 aa8.47□□□□□ -1.05
CHMP2A-202ENST00000596708 DNAJB9Q9UBS3 223 aa8.47□□□□□ -1.05
CHMP2A-202ENST00000596708 LINC00312Q9Y6C7 94 aa8.47□□□□□ -1.05
CHMP2A-202ENST00000596708 IGKV1-27A0A075B6S5 117 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 FAM90A22PA8MWA6 464 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 M0R129 80 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 HAND1O96004 215 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 CYB5AP00167 134 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 IGHA1P01876 353 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 KRT8P05787 483 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 CCL1P22362 96 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 CD24P25063 80 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 DUSP1P28562 367 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 BRS3P32247 399 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 DAPP51397 102 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 SNU13P55769 128 aaKnown RBP8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 SLC35A2P78381 396 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 FLOT2Q14254 428 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 KHDC1LQ5JSQ8 128 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 NXNL2Q5VZ03 156 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 Q6ZSR3 168 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 TCF23Q7RTU1 214 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 C16orf82Q7Z2V1 217 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 ENTHD1Q8IYW4 607 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 NRBF2Q96F24 287 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 GLS2Q9UI32 602 aa8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 TSSC4Q9Y5U2 329 aaPredicted RBP8.46□□□□□ -1.06
CHMP2A-202ENST00000596708 K7EIL1 84 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 MGST3O14880 152 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 MMP23AO75900 390 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 CLIC3O95833 236 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 LPLP06858 475 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 CALCBP10092 127 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 POU3F4P49335 361 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 ARHGDIBP52566 201 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 ATP1B3P54709 279 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 ZNF91Q05481 1191 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 ABCA11PQ4W5N1 156 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 C9orf152Q5JTZ5 239 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 AADACL4Q5VUY2 407 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 OR52W1Q6IF63 320 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 SSX6Q7RTT6 188 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 CATSPERDQ86XM0 798 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 Q8IYB0 196 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 FAM58AQ8N1B3 248 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 ABHD12Q8N2K0 398 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 CCDC197Q8NCU1 140 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 OR4X2Q8NGF9 303 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 TMEM163Q8TC26 289 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 MYDGFQ969H8 173 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 RCC1LQ96I51 464 aaKnown RBP8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 IL4I1Q96RQ9 567 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 SLC25A33Q9BSK2 321 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 KRT84Q9NSB2 600 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 DPM3Q9P2X0 92 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 IL36RNQ9UBH0 155 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 DNAH3Q8TD57 4116 aa8.45□□□□□ -1.06
CHMP2A-202ENST00000596708 FAM172BPA6NC97 362 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 METTL15A6NJ78 407 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 SH2D7A6NKC9 451 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 LEUTXA8MZ59 168 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 SIRPB1O00241 398 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 PSPNO60542 156 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 MITFO75030 526 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 PRKACAP17612 351 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 BCL3P20749 454 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 NPBWR2P48146 333 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 RBP2P50120 134 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 KPNB1Q14974 876 aaKnown RBP8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 TCTEX1D4Q5JR98 221 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 PRAMEF5Q5TYX0 476 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 FAHD1Q6P587 224 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 BAIAP2L2Q6UXY1 529 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 RTN4RL2Q86UN3 420 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 GID4Q8IVV7 300 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 CCDC54Q8NEL0 328 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 OR4P4Q8NGL7 312 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 ZNF596Q8TC21 504 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 BCAS4Q8TDM0 211 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 CHST5Q9GZS9 411 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 GAL3ST2Q9H3Q3 398 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 LIN7BQ9HAP6 207 aa8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 SEBOXQ9HB31 216 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 RBFOX1Q9NWB1 397 aaKnown RBP8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 UBE2J1Q9Y385 318 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-202ENST00000596708 TRGV10A0A0A0MS01 117 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 TRBV2A0A0J9YWF9 115 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 A0A1W2PQL4 384 aaPredicted RBP8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 WI2-2373I1.2A0A1W2PRP0 233 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 TCRBV3S1A0A5B6 114 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 FUOMA2VDF0 154 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 ZAR1LA6NP61 321 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 TOR1AO14656 332 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 SH2D1BO14796 132 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 GYG2O15488 501 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 ENTPD6O75354 484 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 APOL3O95236 402 aa8.43□□□□□ -1.06
CHMP2A-202ENST00000596708 DUS4LO95620 317 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms