RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 MRPL48Q96GC5 212 aaKnown RBP13.92□□□□□ -0.18
RETREG3-210ENST00000590541 C9orf16Q9BUW7 83 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 INPP5EQ9NRR6 644 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 GPR173Q9NS66 373 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 E9PQ18 207 aa13.91□□□□□ -0.18
RETREG3-210ENST00000590541 EBAG9O00559 213 aa13.91□□□□□ -0.18
RETREG3-210ENST00000590541 MPZL2O60487 215 aa13.91□□□□□ -0.18
RETREG3-210ENST00000590541 NXPH2O95156 264 aa13.91□□□□□ -0.18
RETREG3-210ENST00000590541 VDAC2P45880 294 aaPredicted RBP13.91□□□□□ -0.18
RETREG3-210ENST00000590541 PP6455Q8WZ26 134 aa13.91□□□□□ -0.18
RETREG3-210ENST00000590541 NRIP2Q9BQI9 281 aa13.91□□□□□ -0.18
RETREG3-210ENST00000590541 GNG8Q9UK08 70 aa13.91□□□□□ -0.18
RETREG3-210ENST00000590541 RFPL4AA6NLU0 287 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 RFPL4AL1F8VTS6 287 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 SYNGR1O43759 233 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 APOL3O95236 402 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 RPSAP08865 295 aaKnown RBP13.9□□□□□ -0.18
RETREG3-210ENST00000590541 PRDX2P32119 198 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 FUT6P51993 359 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 ZNF85Q03923 595 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 ARSJQ5FYB0 599 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-210ENST00000590541 DMRTC1Q5HYR2 192 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 LDLRAD2Q5SZI1 272 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 TMEM244Q5VVB8 128 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 TMEM200BQ69YZ2 307 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 FDX2Q6P4F2 183 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 RPS4Y2Q8TD47 263 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 CHST5Q9GZS9 411 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 HES4Q9HCC6 221 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 PITPNC1Q9UKF7 332 aa13.9□□□□□ -0.18
RETREG3-210ENST00000590541 DYNC2H1Q8NCM8 4307 aaKnown RBP13.9□□□□□ -0.18
RETREG3-210ENST00000590541 hCG_1809904A0A1W2PP81 198 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 A0A1W2PPE2 198 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 A0A1W2PR64 198 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 A0A1W2PRV1 198 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 DAPL1A0PJW8 107 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ENTPD6O75354 484 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ISG15P05161 165 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 CCL3L1P16619 93 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 CAPZA1P52907 286 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ERVK11-1P61568 191 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ACTA2P62736 377 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ACTG2P63267 376 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ZNF782Q6ZMW2 699 aaPredicted RBP13.89□□□□□ -0.19
RETREG3-210ENST00000590541 CBR4Q8N4T8 237 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ACBD7Q8N6N7 88 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 DNAAF1Q8NEP3 725 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 RNFT2Q96EX2 444 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 Q96MT0 163 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 ABCB10Q9NRK6 738 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 GMPPBQ9Y5P6 360 aa13.89□□□□□ -0.19
RETREG3-210ENST00000590541 TSSC4Q9Y5U2 329 aaPredicted RBP13.89□□□□□ -0.19
RETREG3-210ENST00000590541 LOC107986453A0A1B0GWG9 222 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 J3QRE1 110 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 SLC16A6O15403 523 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 CCR9P51686 369 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 RPL31P62899 125 aaKnown RBP13.88□□□□□ -0.19
RETREG3-210ENST00000590541 SSX2Q16385 188 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 ODF4Q2M2E3 257 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 TP53I3Q53FA7 332 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 CALHM1Q8IU99 346 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 Q8IYB0 196 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 PRSS35Q8N3Z0 413 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 OR2G2Q8NGZ5 317 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 MALSU1Q96EH3 234 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 BORCS8Q96FH0 119 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 SEBOXQ9HB31 216 aaPredicted RBP13.88□□□□□ -0.19
RETREG3-210ENST00000590541 EXOGQ9Y2C4 368 aaKnown RBP13.88□□□□□ -0.19
RETREG3-210ENST00000590541 U3KQK5 164 aa13.88□□□□□ -0.19
RETREG3-210ENST00000590541 SACSQ9NZJ4 4579 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 FAM230AA0A1W2PPH8 454 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 TCRBV4S1A1TA0A5B7 111 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 A6NIN4 97 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 ODF3BA8MYP8 253 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 ALDOBP05062 364 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 JUNBP17275 347 aaPredicted RBP13.87□□□□□ -0.19
RETREG3-210ENST00000590541 RBP2P50120 134 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 ZNF273Q14593 569 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 UBE2V2Q15819 145 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 ZIK1Q3SY52 487 aaPredicted RBP13.87□□□□□ -0.19
RETREG3-210ENST00000590541 ZBTB49Q6ZSB9 765 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 UTS2BQ765I0 119 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 ANGPTL5Q86XS5 388 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 CD177Q8N6Q3 437 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 LINC00482Q8N8I6 264 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 TRMT10AQ8TBZ6 339 aaKnown RBP13.87□□□□□ -0.19
RETREG3-210ENST00000590541 HAVCR2Q8TDQ0 301 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 MYDGFQ969H8 173 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 FOXRED1Q96CU9 486 aaPredicted RBP13.87□□□□□ -0.19
RETREG3-210ENST00000590541 CEP19Q96LK0 163 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 ZNF488Q96MN9 340 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 S100A14Q9HCY8 104 aa13.87□□□□□ -0.19
RETREG3-210ENST00000590541 TBL2Q9Y4P3 447 aaKnown RBP13.87□□□□□ -0.19
RETREG3-210ENST00000590541 FADS2O95864 444 aaKnown RBP13.86□□□□□ -0.19
RETREG3-210ENST00000590541 CYB5AP00167 134 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 ARG1P05089 322 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 CHRM2P08172 466 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 HTR1AP08908 422 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 PRKACBP22694 351 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 KIR3DL2P43630 455 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms