RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ACOT1Q86TX2 421 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 ZSCAN4Q8NAM6 433 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-203ENST00000585448 OR2Y1Q8NGV0 311 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 SYNPRQ8TBG9 265 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 SEC22AQ96IW7 307 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 OR10C1Q96KK4 312 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 PGLYRP2Q96PD5 576 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 SIGLEC12Q96PQ1 595 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 TRIB3Q96RU7 358 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF607Q96SK3 696 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 RNF126Q9BV68 326 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 VCX2Q9H322 139 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 A4GALTQ9NPC4 353 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 OR2S2Q9NQN1 319 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 TM7SF3Q9NS93 570 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 SIRT3Q9NTG7 399 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-203ENST00000585448 TRMT112Q9UI30 125 aaKnown RBP5.31□□□□□ -1.56
SMAD4-203ENST00000585448 FBXW2Q9UKT8 454 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 SLC7A7Q9UM01 511 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 KCNK6Q9Y257 313 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 MRPS33Q9Y291 106 aaKnown RBP5.31□□□□□ -1.56
SMAD4-203ENST00000585448 AK6Q9Y3D8 172 aaKnown RBP5.31□□□□□ -1.56
SMAD4-203ENST00000585448 URGCP-MRPS24S4R325 110 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 PHLPP1O60346 1717 aa5.31□□□□□ -1.56
SMAD4-203ENST00000585448 SBF2Q86WG5 1849 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 KCPQ6ZWJ8 1503 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TRAV8-7A0A075B6U6 113 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 IGHV2-26A0A0B4J1V2 119 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 A0A1B0GU03 582 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 IGLC7A0M8Q6 106 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 A4D1N5 150 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 ARL5CA6NH57 179 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 YDJCA8MPS7 323 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 HIDE1A8MVS5 230 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 B9A039 149 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 H7BYZ3 331 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 J3QR89 54 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 J3QRE1 110 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TMPRSS11DO60235 418 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 GCM2O75603 506 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SOX14O95416 240 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 MT-ATP6P00846 226 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 HLA-AP01891 365 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 HBE1P02100 147 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TYMSP04818 313 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 CTSDP07339 412 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 IGLC2P0DOY2 106 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 IGLC3P0DOY3 106 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 CD99P14209 185 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TCN2P20062 427 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 F2RP25116 425 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 ELAVL4P26378 380 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 PRLHRP49683 370 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 CNN1P51911 297 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SLC25A1P53007 311 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 YPEL5P62699 121 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 FOXF1Q12946 379 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 INSL4Q14641 139 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 EXT1Q16394 746 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 HIST3H3Q16695 136 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TCEAL5Q5H9L2 206 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 ACTL10Q5JWF8 245 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 PLCXD3Q63HM9 321 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 RPL7L1Q6DKI1 246 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 DMKNQ6E0U4 476 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SLC8B1Q6J4K2 584 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 PWWP2BQ6NUJ5 590 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TRIM40Q6P9F5 258 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 PARS2Q7L3T8 475 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SYT13Q7L8C5 426 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 BCDIN3DQ7Z5W3 292 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 YRDCQ86U90 279 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 OR10G3Q8NGC4 313 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 OR1N2Q8NGR9 330 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SMPDL3BQ92485 455 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SUSD6Q92537 303 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 PTX4Q96A99 478 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SDSLQ96GA7 329 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SLC35G5Q96KT7 338 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 HARBI1Q96MB7 349 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TSPAN32Q96QS1 320 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 OR5B12Q96R08 314 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 ARHGDIGQ99819 225 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 ABHD14AQ9BUJ0 271 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 ABHD6Q9BV23 337 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 TPPP3Q9BW30 176 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 CHST6Q9GZX3 395 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 KLK15Q9H2R5 256 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 R3HDMLQ9H3Y0 253 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 BANF2Q9H503 90 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SLC32A1Q9H598 525 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 GEMIN7Q9H840 131 aaKnown RBP5.3□□□□□ -1.56
SMAD4-203ENST00000585448 Q9N2K0 584 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 RAB18Q9NP72 206 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 DLL3Q9NYJ7 618 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 KIAA1456Q9P272 454 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 P2RX2Q9UBL9 471 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 SLC2A6Q9UGQ3 507 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 JPT1Q9UK76 154 aa5.3□□□□□ -1.56
SMAD4-203ENST00000585448 PAM16Q9Y3D7 125 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms