RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 AASSQ9UDR5 926 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 HHLA2Q9UM44 414 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 TBL2Q9Y4P3 447 aaKnown RBP12.86□□□□□ -0.35
CRLF3-203ENST00000578692 MEGF8Q7Z7M0 2845 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 TRBV2A0A0J9YWF9 115 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 PSPNO60542 156 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 IGHA1P01876 353 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 OCM2P0CE71 109 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
CRLF3-203ENST00000578692 CALCBP10092 127 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 PRKACAP17612 351 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 GABRR1P24046 479 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 DUSP1P28562 367 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 RAB13P51153 203 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 EFNB2P52799 333 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 PDZK1IP1Q13113 114 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 HERPUD1Q15011 391 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 ZNF146Q15072 292 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 GRK1Q15835 563 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 ZNF626Q68DY1 528 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 C11orf88Q6PI97 169 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 Q6ZTK2 550 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 CBR4Q8N4T8 237 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 TPRX1Q8N7U7 411 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 DTX3Q8N9I9 347 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 OR2T6Q8NHC8 308 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 SPSB1Q96BD6 273 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 PELI1Q96FA3 418 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 C4orf36Q96KX1 117 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 GLS2Q9UI32 602 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 GMPPBQ9Y5P6 360 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 DSCAML1Q8TD84 2053 aa12.85□□□□□ -0.35
CRLF3-203ENST00000578692 ODF3BA8MYP8 253 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 TSPAN15O95858 294 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 SNU13P55769 128 aaKnown RBP12.84□□□□□ -0.35
CRLF3-203ENST00000578692 ACTA2P62736 377 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 ACTG2P63267 376 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
CRLF3-203ENST00000578692 ALKBH1Q13686 389 aaKnown RBP12.84□□□□□ -0.35
CRLF3-203ENST00000578692 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 SSX2Q16385 188 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 C2orf68Q2NKX9 166 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 PLA1AQ53H76 456 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 SPIN3Q5JUX0 258 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 CCDC121Q6ZUS5 278 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 TCF23Q7RTU1 214 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 LHFPL3Q86UP9 236 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 OR4S1Q8NGB4 309 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 OR51A4Q8NGJ6 313 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 OR13C3Q8NGS6 347 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 OR10AC1Q8NH08 325 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
CRLF3-203ENST00000578692 FOXRED1Q96CU9 486 aaPredicted RBP12.84□□□□□ -0.35
CRLF3-203ENST00000578692 LGALS12Q96DT0 336 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 MRPL48Q96GC5 212 aaKnown RBP12.84□□□□□ -0.35
CRLF3-203ENST00000578692 OPALINQ96PE5 141 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 MYCBPQ99417 103 aaPredicted RBP12.84□□□□□ -0.35
CRLF3-203ENST00000578692 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 ABCB10Q9NRK6 738 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 LINC00312Q9Y6C7 94 aa12.84□□□□□ -0.35
CRLF3-203ENST00000578692 MEGF11A6BM72 1044 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 OR4C45A6NMZ5 311 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 SH2D1BO14796 132 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 MGST3O14880 152 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 CHST1O43916 411 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 CSF1P09603 554 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 GABRB1P18505 474 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 GALEQ14376 348 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 LDLRAD2Q5SZI1 272 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 ZNF676Q8N7Q3 588 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 NKX3-1Q99801 234 aaPredicted RBP12.83□□□□□ -0.36
CRLF3-203ENST00000578692 C9orf16Q9BUW7 83 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 CDCA4Q9BXL8 241 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 FOXJ3Q9UPW0 622 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 GSTK1Q9Y2Q3 226 aa12.83□□□□□ -0.36
CRLF3-203ENST00000578692 TET2Q6N021 2002 aaPredicted RBP12.83□□□□□ -0.36
CRLF3-203ENST00000578692 IGKV1-12A0A0C4DH73 117 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 MPZL2O60487 215 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 IGKV1D-12P01611 117 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 MT-ND2P03891 347 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 ERP29P30040 261 aaKnown RBP12.82□□□□□ -0.36
CRLF3-203ENST00000578692 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
CRLF3-203ENST00000578692 CCBE1Q6UXH8 406 aaPredicted RBP12.82□□□□□ -0.36
CRLF3-203ENST00000578692 RNF144BQ7Z419 303 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 OR13C9Q8NGT0 318 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 RHOXF1Q8NHV9 184 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 RPS4Y2Q8TD47 263 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 Q96MT0 163 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 SPACA5Q96QH8 159 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 SLC29A1Q99808 456 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 ALG8Q9BVK2 526 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 ISG20L2Q9H9L3 353 aaKnown RBP12.82□□□□□ -0.36
CRLF3-203ENST00000578692 NEK6Q9HC98 313 aa12.82□□□□□ -0.36
CRLF3-203ENST00000578692 AMBNQ9NP70 447 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms