RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 EDDM3AQ14507 147 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 MIDNQ504T8 468 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 SYS1Q8N2H4 156 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 OR5R1Q8NH85 324 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 RFT1Q96AA3 541 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 MYCBPQ99417 103 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 PPA2Q9H2U2 334 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 FGF20Q9NP95 211 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 C8orf4Q9NR00 106 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 INPP5EQ9NRR6 644 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 RBFOX1Q9NWB1 397 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 IL36RNQ9UBH0 155 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 HHLA2Q9UM44 414 aa10.36□□□□□ -0.75
NPLOC4-213ENST00000573519 CASQ2O14958 399 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 HAND1O96004 215 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 PRKACAP17612 351 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 PRKACBP22694 351 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 GABRR1P24046 479 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 PAX6P26367 422 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 DUSP1P28562 367 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 CAPGP40121 348 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 NPBWR2P48146 333 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 BMXP51813 675 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 GTF2A1P52655 376 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 GBX2P52951 348 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 LY6EQ16553 131 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 Q6ZSV7 163 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 LHFPL2Q6ZUX7 228 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 Q8IYB0 196 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 BEND2Q8NDZ0 799 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 DNAAF1Q8NEP3 725 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 OR13C9Q8NGT0 318 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 LINC01006Q8NI28 216 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 OPALINQ96PE5 141 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 SPACA5Q96QH8 159 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 SSX3Q99909 188 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 PDCD1LG2Q9BQ51 273 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 CHST6Q9GZX3 395 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 NEK6Q9HC98 313 aa10.35□□□□□ -0.75
NPLOC4-213ENST00000573519 TMEM82A0PJX8 343 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 ZNF737O75373 536 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 ZFPL1O95159 310 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 TGFBR2P37173 567 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 GRK1Q15835 563 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 LRRC75BQ2VPJ9 315 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 OR2G6Q5TZ20 316 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 TREML4Q6UXN2 200 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 UTS2BQ765I0 119 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 RNF144BQ7Z419 303 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 OR8H2Q8N162 312 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 FAM58AQ8N1B3 248 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 C11orf42Q8N5U0 333 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 TPRX1Q8N7U7 411 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 ZSCAN4Q8NAM6 433 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 SETD9Q8NE22 299 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 OR5D18Q8NGL1 313 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 GGHQ92820 318 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 SPSB1Q96BD6 273 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 SNX22Q96L94 193 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 DCLRE1BQ9H816 532 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 CLEC2DQ9UHP7 191 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 GLS2Q9UI32 602 aa10.34□□□□□ -0.75
NPLOC4-213ENST00000573519 TRBV2A0A0J9YWF9 115 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 C17orf98A8MV24 154 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 SIRPB1O00241 398 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 ARG1P05089 322 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 HCKP08631 526 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 ZNF728P0DKX0 622 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 DCKP27707 260 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 SLC34A1Q06495 639 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 PDZK1IP1Q13113 114 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 DYNC1I2Q13409 638 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 PLA1AQ53H76 456 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 XAF1Q6GPH4 301 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 LAIR2Q6ISS4 152 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 TRAPPC6BQ86SZ2 158 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 C8orf59Q8N0T1 100 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 OR52N4Q8NGI2 321 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 OR13D1Q8NGV5 346 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 OR5AK2Q8NH90 309 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 TSEN15Q8WW01 171 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 NRG4Q8WWG1 115 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 ZNF714Q96N38 554 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 JAM3Q9BX67 310 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 COMMD4Q9H0A8 199 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 ZCCHC4Q9H5U6 513 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 GSTK1Q9Y2Q3 226 aa10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 SIRT4Q9Y6E7 314 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-213ENST00000573519 hADV38S2A0JD32 116 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 TMEM212A6NML5 194 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 XPNPEP2O43895 674 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 CCDC159P0C7I6 412 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 SOX2P48431 317 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 DLX6P56179 175 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 KRTAP10-3P60369 221 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 SCN1BQ07699 218 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 IL18R1Q13478 541 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 SPIN3Q5JUX0 258 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 SLC35E4Q6ICL7 350 aa10.32□□□□□ -0.76
NPLOC4-213ENST00000573519 TMPRSS11AQ6ZMR5 421 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms