RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TMEM200AQ86VY9 491 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 OR8H3Q8N146 312 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 SCGB3A2Q96PL1 93 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 COL25A1Q9BXS0 654 aaPredicted RBP16.36■□□□□ 0.21
SMPD3-203ENST00000563226 CDH20Q9HBT6 801 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 MPC1Q9Y5U8 109 aa16.36■□□□□ 0.21
SMPD3-203ENST00000563226 ANKRD34BA5PLL1 514 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 DUSP1P28562 367 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 S100A11P31949 105 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 PTGER4P35408 488 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 GMFBP60983 142 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 PPP1CBP62140 327 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 Q6ZS92 163 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 WDR31Q8NA23 367 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 PPP1R1CQ8WVI7 109 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 BSNQ9UPA5 3926 aa16.35■□□□□ 0.21
SMPD3-203ENST00000563226 EEF1E1-BLOC1S5C9J1V9 151 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 TNFSF13O75888 250 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 KNG1P01042 644 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 SERPINF1P36955 418 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 ALKBH6Q3KRA9 238 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 FBXW12Q6X9E4 464 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 RBMXL3Q8N7X1 1067 aaKnown RBP16.34■□□□□ 0.21
SMPD3-203ENST00000563226 EXTL1Q92935 676 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 ARL6Q9H0F7 186 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 C12orf4Q9NQ89 552 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 NECAP2Q9NVZ3 263 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 PTPRZ1P23471 2315 aaPredicted RBP16.34■□□□□ 0.21
SMPD3-203ENST00000563226 AHRRA9YTQ3 701 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 TRAPPC2LH3BP13 241 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 ADAP1O75689 374 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 AP2S1P53680 142 aaPredicted RBP16.34■□□□□ 0.21
SMPD3-203ENST00000563226 SURF2Q15527 256 aaPredicted RBP16.34■□□□□ 0.21
SMPD3-203ENST00000563226 NSUN5P2Q63ZY6 315 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 INO80CQ6PI98 192 aaPredicted RBP16.34■□□□□ 0.21
SMPD3-203ENST00000563226 C5orf24Q7Z6I8 188 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 MKXQ8IYA7 352 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 CCDC36Q8IYA8 594 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 MFFQ9GZY8 342 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 OPN3Q9H1Y3 402 aaPredicted RBP16.34■□□□□ 0.21
SMPD3-203ENST00000563226 RDH8Q9NYR8 311 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 SPTBN2O15020 2390 aa16.34■□□□□ 0.21
SMPD3-203ENST00000563226 C13orf42A0A1B0GVH6 325 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 OR5B21A6NL26 309 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 CNOT4O95628 575 aaKnown RBP16.33■□□□□ 0.21
SMPD3-203ENST00000563226 IFNA7P01567 189 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 RPA2P15927 270 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 CALCRP30988 508 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 GNG3P63215 75 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 NHLRC3Q5JS37 347 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 OR2A2Q6IF42 318 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 ZNF610Q8N9Z0 462 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 SLC25A40Q8TBP6 338 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 LHX6Q9UPM6 363 aa16.33■□□□□ 0.21
SMPD3-203ENST00000563226 SHANK1Q9Y566 2161 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 RPS10-NUDT3A0A1W2PQS6 291 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 C5orf51A6NDU8 294 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A10PA6NDY2 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A18PA6NE21 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A16PA6NEW6 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A20PA6NIJ5 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A8PA6NJQ4 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A7PA6NKC0 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 MPTX1A8MV57 137 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A22PA8MWA6 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A12PA8MX19 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A5PA8MXJ8 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A23PA8MXZ1 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 HSPB6O14558 160 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 RHBDL1O75783 438 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A15PP0C7V4 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A13PP0C7W8 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A14PP0C7W9 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 FAM90A24PP0C7X0 464 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 PRKACAP17612 351 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 C4BPBP20851 252 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 C11orf87Q6NUJ2 197 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 WDR86Q86TI4 376 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 ZNF546Q86UE3 836 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 CXorf67Q86X51 503 aaPredicted RBP16.33■□□□□ 0.2
SMPD3-203ENST00000563226 C17orf78Q8N4C9 275 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 SNIP1Q8TAD8 396 aaKnown RBP16.33■□□□□ 0.2
SMPD3-203ENST00000563226 STARD4Q96DR4 205 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 ZNF286AQ9HBT8 521 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 PLSCR4Q9NRQ2 329 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 DECR2Q9NUI1 292 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 UBQLN2Q9UHD9 624 aa16.33■□□□□ 0.2
SMPD3-203ENST00000563226 C14orf166Q9Y224 244 aaKnown RBP16.33■□□□□ 0.2
SMPD3-203ENST00000563226 MRPL49Q13405 166 aaKnown RBP16.32■□□□□ 0.2
SMPD3-203ENST00000563226 ATXN7L3Q14CW9 347 aaPredicted RBP16.32■□□□□ 0.2
SMPD3-203ENST00000563226 TMEM211Q6ICI0 200 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 DHRS11Q6UWP2 260 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 C3P1Q6ZMU1 363 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 RPRMLQ8N4K4 120 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 IRF2BPLQ9H1B7 796 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 WDR13Q9H1Z4 485 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 OR51I2Q9H344 312 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 COMMD9Q9P000 198 aa16.32■□□□□ 0.2
SMPD3-203ENST00000563226 RCC2Q9P258 522 aaKnown RBP16.32■□□□□ 0.2
SMPD3-203ENST00000563226 J3QW42 95 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms