RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PDZD11Q5EBL8 140 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 KRTAP13-1Q8IUC0 172 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 OR8S1Q8NH09 359 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 CIDECQ96AQ7 238 aaPredicted RBP2.56□□□□□ -2
LINC00557-201ENST00000563184 OR2M4Q96R27 311 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 SRRQ9GZT4 340 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 SDHAF2Q9NX18 166 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 RBM12B-AS1Q9P1G2 102 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 ZNF230Q9UIE0 474 aaPredicted RBP2.56□□□□□ -2
LINC00557-201ENST00000563184 MROH5Q6ZUA9 1318 aa2.56□□□□□ -2
LINC00557-201ENST00000563184 H3BQ85 93 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 C15orf65H3BRN8 121 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 ENDOGQ14249 297 aaKnown RBP2.55□□□□□ -2
LINC00557-201ENST00000563184 GUSBP1Q15486 140 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 TMEM241Q24JQ0 296 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 Q499Y3 187 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 CLEC12AQ5QGZ9 265 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 AMMECR1LQ6DCA0 310 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 ZNF470Q6ECI4 717 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 LINC00596Q86U02 117 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 C22orf15Q8WYQ4 148 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 PKMYT1Q99640 499 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 DSN1Q9H410 356 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 WDR55Q9H6Y2 383 aaPredicted RBP2.55□□□□□ -2
LINC00557-201ENST00000563184 VAPAQ9P0L0 249 aa2.55□□□□□ -2
LINC00557-201ENST00000563184 ZBED9Q6R2W3 1325 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 GMNCA6NCL1 334 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 GYG2O15488 501 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 SLC37A4O43826 429 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 TRGV3P03979 118 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 IMPA1P29218 277 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 NUDT2P50583 147 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 ACTL10Q5JWF8 245 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 FAHD1Q6P587 224 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 OR8A1Q8NGG7 326 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 DOK4Q8TEW6 326 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 CCL17Q92583 94 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 DUSP21Q9H596 190 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 SDHAF3Q9NRP4 125 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 ASF1BQ9NVP2 202 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 RMND1Q9NWS8 449 aa2.54□□□□□ -2
LINC00557-201ENST00000563184 A0A1B0GXF2 115 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 FFAR1O14842 300 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 M6PRP20645 277 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 DEKP35659 375 aaKnown RBP2.53□□□□□ -2
LINC00557-201ENST00000563184 ATP6AP1LQ52LC2 224 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 HCP5Q6MZN7 132 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 UGT2A3Q6UWM9 527 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 ZFP82Q8N141 532 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 OR6K2Q8NGY2 324 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 OR51Q1Q8NH59 317 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 CDKL2Q92772 493 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 OTUB2Q96DC9 234 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 LRRC39Q96DD0 335 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 FMC1Q96HJ9 113 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 TSGA10Q9BZW7 698 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 VCX3AQ9NNX9 186 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 NLE1Q9NVX2 485 aaPredicted RBP2.53□□□□□ -2
LINC00557-201ENST00000563184 ZNF586Q9NXT0 402 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 ZNF780BQ9Y6R6 833 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 ICOSQ9Y6W8 199 aa2.53□□□□□ -2
LINC00557-201ENST00000563184 IGHV3-43A0A0B4J1X8 118 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 RBFOX3A6NFN3 312 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 E7EWF7 191 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 COX7A2P2O60397 106 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 CPSF4O95639 269 aaKnown RBP2.52□□□□□ -2.01
LINC00557-201ENST00000563184 PTHLHP12272 177 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 FOXA1P55317 472 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 C2orf80Q0P641 193 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 GPR176Q14439 515 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 TNXAQ16473 311 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 RESP18Q5W5W9 173 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 TPGS1Q6ZTW0 290 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 USP50Q70EL3 339 aaPredicted RBP2.52□□□□□ -2.01
LINC00557-201ENST00000563184 AMN1Q8IY45 258 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 ACTL9Q8TC94 416 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 LGALS14Q8TCE9 139 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 VAT1Q99536 393 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 HINT2Q9BX68 163 aa2.52□□□□□ -2.01
LINC00557-201ENST00000563184 RBMX2Q9Y388 322 aaKnown RBP2.52□□□□□ -2.01
LINC00557-201ENST00000563184 UPK2O00526 184 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 RGS5O15539 181 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 ENSAO43768 121 aaKnown RBP2.51□□□□□ -2.01
LINC00557-201ENST00000563184 IGHMP01871 453 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 VAMP3Q15836 100 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 ZNF141Q15928 474 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 GLYATQ6IB77 296 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 PAGE2Q7Z2X7 111 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 GALNT10Q86SR1 603 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 CLHC1Q8NHS4 586 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 BLNKQ8WV28 456 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 ZNF396Q96N95 335 aaPredicted RBP2.51□□□□□ -2.01
LINC00557-201ENST00000563184 YPEL4Q96NS1 127 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 ZNF436Q9C0F3 470 aaPredicted RBP2.51□□□□□ -2.01
LINC00557-201ENST00000563184 NXF2Q9GZY0 626 aaKnown RBP2.51□□□□□ -2.01
LINC00557-201ENST00000563184 POMKQ9H5K3 350 aa2.51□□□□□ -2.01
LINC00557-201ENST00000563184 NACADO15069 1562 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms