RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SMPD3Q9NY59 655 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-208ENST00000558827 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-208ENST00000558827 SIGLEC9Q9Y336 463 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 RPL36Q9Y3U8 105 aaKnown RBP10.19□□□□□ -0.78
SMAD3-208ENST00000558827 RNF114Q9Y508 228 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 DSCAML1Q8TD84 2053 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 MPZL2O60487 215 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 PSPNO60542 156 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 ZFPL1O95159 310 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 NDUFA7O95182 113 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 CYB5AP00167 134 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 ISG15P05161 165 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 HCKP08631 526 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 LIMS3P0CW19 117 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 LIMS4P0CW20 117 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 TMEM225BP0DP42 221 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 JUNBP17275 347 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-208ENST00000558827 ETV1P50549 477 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 CCR9P51686 369 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 GBX2P52951 348 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-208ENST00000558827 DLX6P56179 175 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 LGALS4P56470 323 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 ACTA2P62736 377 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 ACTG2P63267 376 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 PDZK1IP1Q13113 114 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 DYNC1I2Q13409 638 aaKnown RBP10.18□□□□□ -0.78
SMAD3-208ENST00000558827 GRK1Q15835 563 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 OR2G6Q5TZ20 316 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 XAF1Q6GPH4 301 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 UTS2BQ765I0 119 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 TCF23Q7RTU1 214 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 SATL1Q86VE3 508 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 DYNAPQ8N1N2 210 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 OR5AK2Q8NH90 309 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 LINC01006Q8NI28 216 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 WFDC12Q8WWY7 111 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 C10orf35Q96D05 121 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 ORAI1Q96D31 301 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 MRPL48Q96GC5 212 aaKnown RBP10.18□□□□□ -0.78
SMAD3-208ENST00000558827 SNX22Q96L94 193 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 DMRTB1Q96MA1 342 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 NR1H4Q96RI1 486 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-208ENST00000558827 SLITRK2Q9H156 845 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 ZCCHC4Q9H5U6 513 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 HEXA-AS1Q9H8Q6 139 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 CMYA5Q8N3K9 4069 aa10.18□□□□□ -0.78
SMAD3-208ENST00000558827 TRBV2A0A0J9YWF9 115 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 A0A1W2PPH5 198 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 FAM172BPA6NC97 362 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 ARG1P05089 322 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 ZNF728P0DKX0 622 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 PEX2P28328 305 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 ACSM1Q08AH1 577 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 RAB40BQ12829 278 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 IL18R1Q13478 541 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 RCN1Q15293 331 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 ZSCAN26Q16670 478 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 KLHL22Q53GT1 634 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 CRIP3Q6Q6R5 217 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 BAIAP2L2Q6UXY1 529 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 GDPGP1Q6ZNW5 385 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 LHFPL2Q6ZUX7 228 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 OR8H2Q8N162 312 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 ZFP41Q8N8Y5 198 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 BEND2Q8NDZ0 799 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 DNAAF1Q8NEP3 725 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 FAM234AQ9H0X4 552 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 CLEC2DQ9UHP7 191 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 DHDHQ9UQ10 334 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 MMP24Q9Y5R2 645 aa10.17□□□□□ -0.78
SMAD3-208ENST00000558827 SIRT4Q9Y6E7 314 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-208ENST00000558827 hCG_1809904A0A1W2PP81 198 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 A0A1W2PPE2 198 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 A0A1W2PR64 198 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 A0A1W2PRV1 198 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 C17orf98A8MV24 154 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 MMP23AO75900 390 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 RPSAP08865 295 aaKnown RBP10.16□□□□□ -0.78
SMAD3-208ENST00000558827 ZNF44P15621 663 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 OR3A1P47881 315 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 FAM189A2Q15884 450 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 MIDNQ504T8 468 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 LDLRAD2Q5SZI1 272 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 SLC35E4Q6ICL7 350 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 TRAPPC6BQ86SZ2 158 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 SYS1Q8N2H4 156 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 ZSCAN4Q8NAM6 433 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-208ENST00000558827 OR51A2Q8NGJ7 313 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 OR13C5Q8NGS8 318 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 OR10K1Q8NGX5 313 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 PPP1R35Q8TAP8 253 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 RGP1Q92546 391 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-208ENST00000558827 SPSB1Q96BD6 273 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 COMMD4Q9H0A8 199 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 HMG20AQ9NP66 347 aa10.16□□□□□ -0.78
SMAD3-208ENST00000558827 FGF20Q9NP95 211 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-208ENST00000558827 EXOSC4Q9NPD3 245 aaKnown RBP10.16□□□□□ -0.78
SMAD3-208ENST00000558827 TAS2R4Q9NYW5 299 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms