RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 AKR7A2O43488 359 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR2A4O95047 310 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SNX4O95219 450 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 GCGP01275 180 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 KLK1P06870 262 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 LIPCP11150 499 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 RAB5AP20339 215 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CD9P21926 228 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CD82P27701 267 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 GABRR2P28476 465 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 S100A2P29034 98 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 BLVRBP30043 206 aaPredicted RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 RRM2P31350 389 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 EVI2BP34910 448 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 P2RY2P41231 377 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 GABRA4P48169 554 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SULT1E1P49888 294 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 HCCSP53701 268 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SLC18A1P54219 525 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 ATP5J2P56134 94 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 RPL10AP62906 217 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SLC35A1P78382 337 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 RPL18AQ02543 176 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 GBE1Q04446 702 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 KDSRQ06136 332 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 MERTKQ12866 999 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CASP8Q14790 479 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 PPP1R7Q15435 360 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SSX1Q16384 188 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SSX2Q16385 188 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 HADHQ16836 314 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 C5orf64Q2M2E5 130 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CEACAM16Q2WEN9 425 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 ZNF404Q494X3 552 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CARD17Q5XLA6 110 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 ELP2Q6IA86 826 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 ZNF773Q6PK81 442 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CLEC2AQ6UVW9 174 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CLEC19AQ6UXS0 136 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 TPGS1Q6ZTW0 290 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 NDUFAF7Q7L592 441 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 TAS2R42Q7RTR8 314 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 KRTAP19-3Q7Z4W3 81 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 FAM19A3Q7Z5A8 133 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 FAM19A1Q7Z5A9 133 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 DPPA2Q7Z7J5 298 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 APRG1Q8IVJ8 170 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CMTM8Q8IZV2 173 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 GAPTQ8N292 157 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 JAGN1Q8N5M9 183 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 C2orf73Q8N5S3 287 aaPredicted RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR11G2Q8NGC1 345 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR52K1Q8NGK4 314 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR5H2Q8NGV7 314 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR4A5Q8NH83 315 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR2V1Q8NHB1 315 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 TCP10LQ8TDR4 215 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 C2orf15Q8WU43 125 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 PIH1D2Q8WWB5 315 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CCL17Q92583 94 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 ISOC2Q96AB3 205 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 APOBEC3DQ96AK3 386 aaPredicted RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 FAM131CQ96AQ9 280 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SNF8Q96H20 258 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 TPD52L3Q96J77 140 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 Q96MT0 163 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR2A7Q96R45 310 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 OR52B2Q96RD2 323 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 LINC01587Q99440 93 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CHP1Q99653 195 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CCDC77Q9BR77 488 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 THTPAQ9BU02 230 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SHCBP1LQ9BZQ2 653 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 API5Q9BZZ5 524 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 AICDAQ9GZX7 198 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 DEFB129Q9H1M3 183 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 C8orf33Q9H7E9 229 aaPredicted RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CD209Q9NNX6 404 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 ABCB9Q9NP78 766 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 MRPS30Q9NP92 439 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 NMRK1Q9NWW6 199 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SLC23A2Q9UGH3 650 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 HPCAL4Q9UM19 191 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 ORC6Q9Y5N6 252 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 URGCP-MRPS24S4R325 110 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 PXDNLA1KZ92 1463 aa0.03□□□□□ -2.41
FOXN3-216ENST00000557496 CEP170Q5SW79 1584 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CACNA1EQ15878 2313 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MYO5BQ9ULV0 1848 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TRAV8-4A0A0B4J246 113 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TRAV25A0A0B4J276 109 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MUC21A0A0G2JKD1 596 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MUC21A0A140T8X8 626 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 LOC389332A0A1B0GUA5 103 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FAM240AA0A1B0GVK7 77 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MDFIC2A0A1B0GVS7 189 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IGSF23A1L1A6 192 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SMCO3A2RU48 225 aa0.02□□□□□ -2.41
FOXN3-216ENST00000557496 VPS37CA5D8V6 355 aaPredicted RBP0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RBFOX3A6NFN3 312 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms