RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 MSGN1A6NI15 193 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 M0QXV9 152 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 CEACAM5P06731 702 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 TMEM128Q5BJH2 165 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 WDR82Q6UXN9 313 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 SRD5A3Q9H8P0 318 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 MEGF6O75095 1541 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 SPINT1O43278 529 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 GYPAP02724 150 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 WASP42768 502 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 FUT6P51993 359 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 DCDP81605 110 aaKnown RBP7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF766Q5HY98 468 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 FBLIM1Q8WUP2 373 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 IGSF8Q969P0 613 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 PRRG4Q9BZD6 226 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 TAPBPO15533 448 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 MSCO60682 206 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 CER1O95813 267 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 PPP1CAP62136 330 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 SNRPD1P62314 119 aaKnown RBP7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 PSG9Q00887 426 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 PLPPR5Q32ZL2 321 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 TTC9BQ8N6N2 239 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 OR2K2Q8NGT1 345 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 PTPMT1Q8WUK0 201 aaPredicted RBP7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 CAPNS2Q96L46 248 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 CYSLTR1Q9Y271 337 aa7.99□□□□□ -1.13
GTF2A1-203ENST00000553612 TMSB15BA0A087X1C1 80 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 SHISA3A0PJX4 238 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 C1QAP02745 245 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 IAPPP10997 89 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 DNLZQ5SXM8 178 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 CALHM1Q8IU99 346 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF485Q8NCK3 441 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF417Q8TAU3 575 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 DGAT2Q96PD7 388 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 MS4A8Q9BY19 250 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ELOVL3Q9HB03 270 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 GSTZ1O43708 216 aaPredicted RBP7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 HRASP01112 189 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 TBPL1P62380 186 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 SLC25A26Q70HW3 274 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 TCF23Q7RTU1 214 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 FUBP3Q96I24 572 aaKnown RBP eCLIP7.98□□□□□ -1.133e-7■■■■■ 31.9
GTF2A1-203ENST00000553612 PDLIM7Q9NR12 457 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 NSG2Q9Y328 171 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 DLC1Q96QB1 1528 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 CACNA1DQ01668 2161 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 SPAARA0A1B0GVQ0 90 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ATP1B2P14415 290 aaPredicted RBP7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 XCR1P46094 333 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 DAP3P51398 398 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF816Q0VGE8 651 aaPredicted RBP7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ANKRD16Q6P6B7 361 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 IL1F10Q8WWZ1 152 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 LSM2Q9Y333 95 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 SCN2AQ99250 2005 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 NSG1A0A0A6YYJ2 146 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 TEX50A0A1B0GTY4 177 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF737O75373 536 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 TAS2R46P59540 309 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 IL13RA2Q14627 380 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 EDAQ92838 391 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 A0A1W2PR48 441 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 NPIPB5A8MRT5 1133 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF217O75362 1048 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 SERF1AO75920 110 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 VENTXO95231 258 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 NRASP01111 189 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 KRASP01116 189 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 GLRXP35754 106 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 PCK2Q16822 640 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ACSF3Q4G176 576 aaPredicted RBP7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 P2RX4Q99571 388 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 FLRT3Q9NZU0 649 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 MTFP1Q9UDX5 166 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 ETV7Q9Y603 341 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 PREX1Q8TCU6 1659 aa7.98□□□□□ -1.13
GTF2A1-203ENST00000553612 SHROOM3Q8TF72 1996 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 TRBV20-1A0A075B6N2 111 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 LATO43561 262 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 NMUP48645 174 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 TRAT1Q6PIZ9 186 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 LINC01551Q86U37 167 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 ZBTB34Q8NCN2 500 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 KIAA1456Q9P272 454 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 DUS4LO95620 317 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 C8AP07357 584 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 ADRA2AP08913 450 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 IGFBP2P18065 325 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 OR1D4P47884 311 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 RPS4XP62701 263 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 C15orf39Q6ZRI6 1047 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 C1orf162Q8NEQ5 155 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 TAS2R4Q9NYW5 299 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 CLTCQ00610 1675 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 IGHV2-70DA0A0C4DH43 119 aa7.97□□□□□ -1.13
GTF2A1-203ENST00000553612 ZNF865P0CJ78 1059 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms