RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 J3QRE1 110 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 INMTO95050 263 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 HTR1AP08908 422 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 COX7A1P24310 79 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 GABRA5P31644 462 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 DLX6P56179 175 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 MTCP1P56278 107 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 ACTA2P62736 377 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 ACTG2P63267 376 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 KPNB1Q14974 876 aaKnown RBP13.13□□□□□ -0.31
DDX55-212ENST00000544738 ZNF782Q6ZMW2 699 aaPredicted RBP13.13□□□□□ -0.31
DDX55-212ENST00000544738 CCDC121Q6ZUS5 278 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 OR4C13Q8NGP0 309 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 EMG1Q92979 244 aaKnown RBP13.13□□□□□ -0.31
DDX55-212ENST00000544738 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
DDX55-212ENST00000544738 SPSB1Q96BD6 273 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 ADAT3Q96EY9 351 aaPredicted RBP13.13□□□□□ -0.31
DDX55-212ENST00000544738 FRRS1LQ9P0K9 344 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 HHLA2Q9UM44 414 aa13.13□□□□□ -0.31
DDX55-212ENST00000544738 TBL2Q9Y4P3 447 aaKnown RBP13.13□□□□□ -0.31
DDX55-212ENST00000544738 TRBV2A0A0J9YWF9 115 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 FAM90A8PA6NJQ4 464 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 H3BNX3 289 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 MPZL2O60487 215 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 HAND1O96004 215 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
DDX55-212ENST00000544738 OCM2P0CE71 109 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 OCMP0CE72 109 aaPredicted RBP13.12□□□□□ -0.31
DDX55-212ENST00000544738 ATF1P18846 271 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 PEX2P28328 305 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 KIR2DS4P43632 304 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 BMXP51813 675 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 OR12D2P58182 307 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 LY6EQ16553 131 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 ZIK1Q3SY52 487 aaPredicted RBP13.12□□□□□ -0.31
DDX55-212ENST00000544738 SPIN3Q5JUX0 258 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 LHFPL2Q6ZUX7 228 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 FAM58AQ8N1B3 248 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 CBR4Q8N4T8 237 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 PPP1R35Q8TAP8 253 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 FGGYQ96C11 551 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 FOXRED1Q96CU9 486 aaPredicted RBP13.12□□□□□ -0.31
DDX55-212ENST00000544738 MALSU1Q96EH3 234 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 ZNF714Q96N38 554 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 RANBP3Q9H6Z4 567 aaPredicted RBP13.12□□□□□ -0.31
DDX55-212ENST00000544738 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
DDX55-212ENST00000544738 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
DDX55-212ENST00000544738 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 E9PQ18 207 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 J3QLW9 94 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 XPNPEP2O43895 674 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 ZNF19P17023 458 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 AZGP1P25311 298 aaKnown RBP13.11□□□□□ -0.31
DDX55-212ENST00000544738 POU3F4P49335 361 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 ZNF146Q15072 292 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 CRIP3Q6Q6R5 217 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 OR11H6Q8NGC7 330 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 OR2T6Q8NHC8 308 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 Q96MT0 163 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 OPALINQ96PE5 141 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 MBOAT4Q96T53 435 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 C9orf16Q9BUW7 83 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 SIGLEC9Q9Y336 463 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 GMPPBQ9Y5P6 360 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 LINC00312Q9Y6C7 94 aa13.11□□□□□ -0.31
DDX55-212ENST00000544738 BIRC6Q9NR09 4857 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 TMEM82A0PJX8 343 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 SH2D1BO14796 132 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 MGST3O14880 152 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 FADS2O95864 444 aaKnown RBP13.1□□□□□ -0.31
DDX55-212ENST00000544738 MT-ND2P03891 347 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 ARG1P05089 322 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 GABRR1P24046 479 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 NANOS3P60323 173 aaKnown RBP13.1□□□□□ -0.31
DDX55-212ENST00000544738 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 PDZK1IP1Q13113 114 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 GALEQ14376 348 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 GRK1Q15835 563 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 ZNF626Q68DY1 528 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 LHFPL4Q7Z7J7 247 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 LYG1Q8N1E2 194 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 OR13C3Q8NGS6 347 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 PIFOQ8TCI5 191 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 RHOFQ9HBH0 211 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 RBFOX1Q9NWB1 397 aaKnown RBP13.1□□□□□ -0.31
DDX55-212ENST00000544738 FOXJ3Q9UPW0 622 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms