RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 MAGEA3P43357 314 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 RAB38P57729 211 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 BTN1A1Q13410 526 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 Q499Y3 187 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 KLHL12Q53G59 568 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 CLEC6AQ6EIG7 209 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 C16orf47Q6ZP98 133 aaPredicted RBP2.2□□□□□ -2.06
PRKDC-205ENST00000535375 CYP4Z2PQ8N1L4 340 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 ZNF664Q8N3J9 261 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 SLC26A10Q8NG04 563 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 ZNF420Q8TAQ5 688 aaPredicted RBP2.2□□□□□ -2.06
PRKDC-205ENST00000535375 UBA3Q8TBC4 463 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 RORBQ92753 470 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 WDR34Q96EX3 536 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 GPR82Q96P67 336 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 OR2M4Q96R27 311 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 DHX35Q9H5Z1 703 aaKnown RBP2.2□□□□□ -2.06
PRKDC-205ENST00000535375 METTL8Q9H825 291 aaKnown RBP2.2□□□□□ -2.06
PRKDC-205ENST00000535375 RDH14Q9HBH5 336 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 CHMP5Q9NZZ3 219 aa2.2□□□□□ -2.06
PRKDC-205ENST00000535375 USP42Q9H9J4 1324 aaKnown RBP2.19□□□□□ -2.06
PRKDC-205ENST00000535375 ADAMTSL3P82987 1691 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 C17orf51A8MQB3 221 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 SGCEO43556 437 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 IGLV6-57P01721 117 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 SNRPAP09012 282 aaKnown RBP2.19□□□□□ -2.06
PRKDC-205ENST00000535375 NQO2P16083 231 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 TAC1P20366 129 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 MPV17P39210 176 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 GCLMP48507 274 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 OR2B6P58173 313 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 CD164Q04900 197 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 BAXQ07812 192 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 MED27Q6P2C8 311 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 UGT2A3Q6UWM9 527 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 CLEC18BQ6UXF7 455 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 FAM231DQ6ZW35 169 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 DRAXINQ8NBI3 349 aaPredicted RBP2.19□□□□□ -2.06
PRKDC-205ENST00000535375 ACBD4Q8NC06 268 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 OR4K17Q8NGC6 315 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 CCL17Q92583 94 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 ATP6V1G3Q96LB4 118 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 SERPINB11Q96P15 392 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 MRPL20Q9BYC9 149 aaKnown RBP2.19□□□□□ -2.06
PRKDC-205ENST00000535375 API5Q9BZZ5 524 aaKnown RBP2.19□□□□□ -2.06
PRKDC-205ENST00000535375 TMBIM4Q9HC24 238 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 PARP11Q9NR21 331 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 NRBP2Q9NSY0 501 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 IL37Q9NZH6 218 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 ENPP5Q9UJA9 477 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 RAB22AQ9UL26 194 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 FADS3Q9Y5Q0 445 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 USH1CQ9Y6N9 552 aa2.19□□□□□ -2.06
PRKDC-205ENST00000535375 MAP3K19Q56UN5 1328 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 SHROOM3Q8TF72 1996 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 LOC389332A0A1B0GUA5 103 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 A0A1W2PNN7 141 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 UPK2O00526 184 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 ENSAO43768 121 aaKnown RBP2.18□□□□□ -2.06
PRKDC-205ENST00000535375 DHRS3O75911 302 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 LDOC1O95751 146 aaPredicted RBP2.18□□□□□ -2.06
PRKDC-205ENST00000535375 IGHV1-46P01743 117 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 RLN2P04090 185 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 GP1BAP07359 652 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 SLC35E2BP0CK96 405 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 GIMD1P0DJR0 217 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 IDH2P48735 452 aaKnown RBP2.18□□□□□ -2.06
PRKDC-205ENST00000535375 TGM4P49221 684 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 TTPAP49638 278 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 ATP5G2Q06055 141 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 TPBGQ13641 420 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 BSXQ3C1V8 233 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 ATP6AP1LQ52LC2 224 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 ZNF470Q6ECI4 717 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 TPGS1Q6ZTW0 290 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 PDPNQ86YL7 162 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 SYCE1Q8N0S2 351 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 OR8G5Q8NG78 346 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 OR2AE1Q8NHA4 323 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 C1orf50Q9BV19 199 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 TSGA10Q9BZW7 698 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 RBM22Q9NW64 420 aaKnown RBP eCLIP2.18□□□□□ -2.06
PRKDC-205ENST00000535375 DNAJC27Q9NZQ0 273 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 RBM12B-AS1Q9P1G2 102 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 STX18Q9P2W9 335 aaKnown RBP2.18□□□□□ -2.06
PRKDC-205ENST00000535375 RWDD2AQ9UIY3 292 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 SNX24Q9Y343 169 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 INSIG2Q9Y5U4 225 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 GMEB1Q9Y692 573 aa2.18□□□□□ -2.06
PRKDC-205ENST00000535375 RPRD2Q5VT52 1461 aaKnown RBP2.18□□□□□ -2.06
PRKDC-205ENST00000535375 LTBP4Q8N2S1 1624 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 A0A1B0GX12 115 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 RBFOX3A6NFN3 312 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 CEACAM18A8MTB9 384 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 PRAMEF26H0Y7S4 382 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 GYG2O15488 501 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 SLC37A4O43826 429 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 OR2A4O95047 310 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 CDK1P06493 297 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 CECR9P0C854 216 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms