RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FOSL1P15407 271 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 P2RY6Q15077 328 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 ZNF705AQ6ZN79 300 aaPredicted RBP14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 TEX29Q8N6K0 151 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 RXFP4Q8TDU9 374 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 NRTNQ99748 197 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 CTDSP1Q9GZU7 261 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 TMEM272A0A1B0GTI8 110 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 SEC14L6B5MCN3 397 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 NPIPB8E9PQR5 432 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 SAP25Q8TEE9 199 aa14.35□□□□□ -0.11
PCDHA3-201ENST00000522353 IGHA2P01877 340 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 TAGLNQ01995 201 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 ZNF770Q6IQ21 691 aaPredicted RBP14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 OR52L2PQ8NGH6 319 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 BCL2L2Q92843 193 aaPredicted RBP14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 CXorf58Q96LI9 332 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 TMEM208Q9BTX3 173 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 PLAC1Q9HBJ0 212 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 ADAMTS7Q9UKP4 1686 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 IGHV3-43A0A0B4J1X8 118 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 AHRRA9YTQ3 701 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 J3QT63 122 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 IGHV3-43DP0DP04 118 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 EXOSC2Q13868 293 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 TCTE3Q8IZS6 198 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 OR52B4Q8NGK2 314 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 WDFY2Q96P53 400 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 TMEM38BQ9NVV0 291 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 RASL12Q9NYN1 266 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 MTFP1Q9UDX5 166 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 ZNF831Q5JPB2 1677 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 LAMB2P55268 1798 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 HRKO00198 91 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 PRF1P14222 555 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 ZNF680Q8NEM1 530 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 RASL11BQ9BPW5 248 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 UBE2L5PA0A1B0GUS4 154 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 MEX3AA1L020 520 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 RFPL4AA6NLU0 287 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 RFPL4AL1F8VTS6 287 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 ICMTO60725 284 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 MESTQ5EB52 335 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 RELL2Q8NC24 303 aaPredicted RBP14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 NTNG2Q96CW9 530 aa14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 RBM38Q9H0Z9 239 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-201ENST00000522353 FAM157AC9JC47 383 aa14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 CST7O76096 145 aa14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 GPR6P46095 362 aaPredicted RBP14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 ZNF721Q8TF20 911 aa14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 UCN2Q96RP3 112 aa14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 DIRC2Q96SL1 478 aa14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 CABLES2Q9BTV7 478 aa14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 GAR1Q9NY12 217 aaKnown RBP14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 NEU3Q9UQ49 428 aa14.33□□□□□ -0.11
PCDHA3-201ENST00000522353 FER1L6Q2WGJ9 1857 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 ZDBF2Q9HCK1 2354 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 A0A1W2PRD5 423 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 A0A1W2PRF3 423 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 A0A1W2PRM7 423 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 TRIM77I1YAP6 450 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 CDIPTO14735 213 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 NKX2-8O15522 239 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 ETFDHQ16134 617 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 NCR3LG1Q68D85 454 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 C11orf87Q6NUJ2 197 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 DGAT2L6Q6ZPD8 337 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC22A18ASQ8N1D0 253 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 LPAR3Q9UBY5 353 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 LSM2Q9Y333 95 aaKnown RBP14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 OOEPA6NGQ2 149 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 DUS4LO95620 317 aaKnown RBP14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 CLEC2AQ6UVW9 174 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 PEBP1P30086 187 aaKnown RBP14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 RAG2P55895 527 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 SP6Q3SY56 376 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 PRR27Q6MZM9 219 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 SFTPA2Q8IWL1 248 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC25A45Q8N413 288 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 COMMD1Q8N668 190 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 SLIRPQ9GZT3 109 aaKnown RBP14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 STRCP1A6NGW2 1772 aa14.33□□□□□ -0.12
PCDHA3-201ENST00000522353 GVINP1Q7Z2Y8 2422 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 UNC13CQ8NB66 2214 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 TMEM210A6NLX4 147 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 CRYBB2P43320 205 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 H3F3AP84243 136 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 HIKESHIQ53FT3 197 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 SLC23A3Q6PIS1 610 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 ZNF574Q6ZN55 896 aaPredicted RBP14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 EPOPA6NHQ4 379 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 ZNRF4Q8WWF5 429 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 HSD17B10Q99714 261 aaKnown RBP14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 CNTD2Q9H8S5 307 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 RAB18Q9NP72 206 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 ZNF230Q9UIE0 474 aaPredicted RBP14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 G3V3Q6 166 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 CA11O75493 328 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 HAND1O96004 215 aa14.32□□□□□ -0.12
PCDHA3-201ENST00000522353 ASCL1P50553 236 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms