RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 GPR137CQ8N3F9 429 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 SNIP1Q8TAD8 396 aaKnown RBP9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 FNDC9Q8TBE3 224 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 SPSB1Q96BD6 273 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 OR10C1Q96KK4 312 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 SCNM1Q9BWG6 230 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF552Q9H707 407 aaPredicted RBP9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 OR5AC2Q9NZP5 309 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 HSF4Q9ULV5 492 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 PTPRBP23467 1997 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 KLRC4-KLRK1H3BQV0 150 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 LINC01387J3KSC0 135 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 ADCYAP1P18509 176 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 SPINK2P20155 84 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 ARHGDIBP52566 201 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 F2RL1P55085 397 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 FAM3AP98173 230 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 GUCA2BQ16661 112 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 CEACAM16Q2WEN9 425 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 RNFT1Q5M7Z0 435 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 KDF1Q8NAX2 398 aaPredicted RBP9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 OR4A4PQ8NGN8 299 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 TMEM38BQ9NVV0 291 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 RCC2Q9P258 522 aaKnown RBP9.56□□□□□ -0.88
SH3RF1-203ENST00000508685 TPRP12270 2363 aaKnown RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 RNASEK-C17orf49H0YIS7 233 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 K7EPK0 472 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 SERPINA5P05154 406 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 HKR1P10072 659 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 FCGR2AP12318 317 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 CD46P15529 392 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 DTYMKP23919 212 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 RPL12P30050 165 aaKnown RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 RRADP55042 308 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 FAM71E2Q8N5Q1 922 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 BOLLQ8N9W6 283 aaKnown RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 ZFP62Q8NB50 900 aaPredicted RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 FDCSPQ8NFU4 85 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 LYZL4Q96KX0 146 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 NRIP2Q9BQI9 281 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 METTL9Q9H1A3 318 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 TLNRD1Q9H1K6 362 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 PLEKHJ1Q9NW61 149 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF391Q9UJN7 358 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 FREM1Q5H8C1 2179 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 A0A1W2PP11 408 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 MSGN1A6NI15 193 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 CRYM-AS1A6NIL9 109 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 M0R135 149 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 SDCBPO00560 298 aaPredicted RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 HTR3BO95264 441 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 SFTPBP07988 381 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 HOXB5P09067 269 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 SERPINA2P20848 420 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 PAX6P26367 422 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 RAB13P51153 203 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 CCL11P51671 97 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 DVL1P1P54792 670 aaPredicted RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 S100A10P60903 97 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 PMP22Q01453 160 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 HGFACQ04756 655 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 RBM39Q14498 530 aaKnown RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 CNN3Q15417 329 aaKnown RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 UBE2V2Q15819 145 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 IAH1Q2TAA2 248 aaPredicted RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF766Q5HY98 468 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 FAM76BQ5HYJ3 339 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 TSPO2Q5TGU0 170 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF774Q6NX45 483 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 TMEM200AQ86VY9 491 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 TUSC5Q8IXB3 177 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 SEMA6DQ8NFY4 1073 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 CPT1CQ8TCG5 803 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF799Q96GE5 643 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 FOXB1Q99853 325 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 DEFB127Q9H1M4 99 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 GPR35Q9HC97 309 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 OR2S2Q9NQN1 319 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 ANXA10Q9UJ72 324 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 PIGLQ9Y2B2 252 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 NOSIPQ9Y314 301 aaKnown RBP9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
SH3RF1-203ENST00000508685 ACACBO00763 2458 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 BSNQ9UPA5 3926 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 IGKV3D-15A0A087WSY6 115 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 PQLC2LA1A4F0 135 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 E5RGE8 158 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 KCNAB3O43448 404 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 SGCEO43556 437 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 MRPL33O75394 65 aaKnown RBP9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 FBXO24O75426 580 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 MED6O75586 246 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 DEDDO75618 318 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 CD5P06127 495 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 PI3P19957 117 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 TNFSF10P50591 281 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 AKR1C2P52895 323 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms