RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 FGF12P61328 243 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 CBX3Q13185 183 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 RBM39Q14498 530 aaKnown RBP8.78□□□□□ -1
HDAC3-214ENST00000495485 GRK1Q15835 563 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 CHRFAM7AQ494W8 412 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 MBNL2Q5VZF2 373 aaKnown RBP8.78□□□□□ -1
HDAC3-214ENST00000495485 RGS7BPQ6MZT1 257 aaPredicted RBP8.78□□□□□ -1
HDAC3-214ENST00000495485 C11orf88Q6PI97 169 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 IDO2Q6ZQW0 420 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 HOGA1Q86XE5 327 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 ZDHHC22Q8N966 263 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 DRAXINQ8NBI3 349 aaPredicted RBP8.78□□□□□ -1
HDAC3-214ENST00000495485 RELL2Q8NC24 303 aaPredicted RBP8.78□□□□□ -1
HDAC3-214ENST00000495485 OR8G5Q8NG78 346 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 OR51S1Q8NGJ8 323 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 NUDCD2Q8WVJ2 157 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 GIMAP1Q8WWP7 306 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 SNAPC3Q92966 411 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 CMSS1Q9BQ75 279 aaKnown RBP8.78□□□□□ -1
HDAC3-214ENST00000495485 OR51B6Q9H340 312 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 RIMS4Q9H426 269 aaPredicted RBP8.78□□□□□ -1
HDAC3-214ENST00000495485 NDRG3Q9UGV2 375 aa8.78□□□□□ -1
HDAC3-214ENST00000495485 AKAP6Q13023 2319 aa8.77□□□□□ -1
HDAC3-214ENST00000495485 A0A0A6YYD4 124 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 A0A0A6YYJ9 748 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 IGHV2OR16-5A0A0B4J2B6 119 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 FAM90A27PA6NNH2 459 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 POM121CA8CG34 1229 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 MCRIP1C9JLW8 97 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 H7C1Q1 480 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 M0R1B8 84 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 TIMM8AO60220 97 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 CELA3BP08861 270 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ACAA1P09110 424 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 KITLGP21583 273 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 CA6P23280 308 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 TAS2R31P59538 309 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ARPC4P59998 168 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 IL13RA2Q14627 380 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 CDK10Q15131 360 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 TSC22D1Q15714 1073 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 TAF9Q16594 264 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ZFP69Q49AA0 526 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 SCGB2B2Q4G0G5 96 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 PLAC9Q5JTB6 97 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 NKAPLQ5M9Q1 402 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 VAX1Q5SQQ9 334 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 SPATA46Q5T0L3 261 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 CRIP3Q6Q6R5 217 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ZNF474Q6S9Z5 364 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 GLDNQ6ZMI3 551 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 RNF144BQ7Z419 303 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 GLCCI1Q86VQ1 547 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 TCTE3Q8IZS6 198 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 FBXL14Q8N1E6 418 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 BHLHE23Q8NDY6 225 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 BEST4Q8NFU0 473 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 OR13G1Q8NGZ3 307 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 OR6F1Q8NGZ6 308 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 KLF14Q8TD94 323 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 FAM222BQ8WU58 562 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ST8SIA4Q92187 359 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 S100PBPQ96BU1 408 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 MARS2Q96GW9 593 aaKnown RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ADAT1Q9BUB4 502 aaKnown RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ST6GALNAC5Q9BVH7 336 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 C1QTNF6Q9BXI9 259 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 CXXC4Q9H2H0 198 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 GHITMQ9H3K2 345 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 MYOZ1Q9NP98 299 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 PURGQ9UJV8 347 aaKnown RBP8.77□□□□□ -1.01
HDAC3-214ENST00000495485 ANAPC10Q9UM13 185 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 KCNK7Q9Y2U2 307 aa8.77□□□□□ -1.01
HDAC3-214ENST00000495485 PRR14LQ5THK1 2151 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 IGHV1-18A0A0C4DH31 117 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 A0A1W2PP11 408 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 TMEM82A0PJX8 343 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 FOXI3A8MTJ6 420 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-214ENST00000495485 BOLA2-SMG1P6H3BVE0 249 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 ANXA3P12429 323 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 COX6B1P14854 86 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 PTAFRP25105 342 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 CHATP28329 748 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 HRH1P35367 487 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 SNU13P55769 128 aaKnown RBP8.76□□□□□ -1.01
HDAC3-214ENST00000495485 NAAAQ02083 359 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 SRSF7Q16629 238 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC3-214ENST00000495485 DMRTC1Q5HYR2 192 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 ATAD3CQ5T2N8 411 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 FAHD2BQ6P2I3 314 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-214ENST00000495485 HAGHLQ6PII5 290 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-214ENST00000495485 SEZ6L2Q6UXD5 910 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 TMEM108Q6UXF1 575 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 CALHM1Q8IU99 346 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 DMRTC2Q8IXT2 367 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-214ENST00000495485 FAM58AQ8N1B3 248 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 OR5AP2Q8NGF4 316 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 TERB2Q8NHR7 220 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 HPSE2Q8WWQ2 592 aa8.76□□□□□ -1.01
HDAC3-214ENST00000495485 ASB13Q8WXK3 278 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms