RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 HOXC12P31275 282 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 SFTPDP35247 375 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 CAV2P51636 162 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 SRPXP78539 464 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 ZNF766Q5HY98 468 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 PDSS1Q5T2R2 415 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 PCSK4Q6UW60 755 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 LIAT1Q6ZQX7 453 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 GALNTL5Q7Z4T8 443 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 OR5A2Q8NGI9 324 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 OR5P3Q8WZ94 311 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 MR1Q95460 341 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 USB1Q9BQ65 265 aaKnown RBP7.3□□□□□ -1.24
RAF1-212ENST00000494557 ZMAT3Q9HA38 289 aaKnown RBP7.3□□□□□ -1.24
RAF1-212ENST00000494557 FSCN3Q9NQT6 498 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 COLQQ9Y215 455 aaPredicted RBP7.3□□□□□ -1.24
RAF1-212ENST00000494557 NRASP01111 189 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 CYB561P49447 251 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 FLI1Q01543 452 aaPredicted RBP7.3□□□□□ -1.24
RAF1-212ENST00000494557 CCDC36Q8IYA8 594 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 CLRN3Q8NCR9 226 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 CSNK2A3Q8NEV1 391 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 THAP6Q8TBB0 222 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 GLYATL2Q8WU03 294 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 APOBEC3DQ96AK3 386 aaPredicted RBP7.3□□□□□ -1.24
RAF1-212ENST00000494557 TUBA4BQ9H853 241 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 MBNL3Q9NUK0 354 aaKnown RBP7.3□□□□□ -1.24
RAF1-212ENST00000494557 PARPBPQ9NWS1 579 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 P4HTMQ9NXG6 502 aa7.3□□□□□ -1.24
RAF1-212ENST00000494557 ZNF891A8MT65 544 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 PATE3B3GLJ2 98 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 LAMTOR5O43504 91 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 PDGFBP01127 241 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 FCGR2AP12318 317 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 PGAM2P15259 253 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 ZNF14P17017 642 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 COX5AP20674 150 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 BLVRBP30043 206 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 ARR3P36575 388 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 ZNF169Q14929 603 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 PDLIM3Q53GG5 364 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 RAET1LQ5VY80 246 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 ATRAIDQ6UW56 229 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 OR10K1Q8NGX5 313 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 FAM71F1Q96KD3 344 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 GLRX2Q9NS18 164 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 COA4Q9NYJ1 87 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 TMED3Q9Y3Q3 217 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 RNF115Q9Y4L5 304 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 WIPI2Q9Y4P8 454 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 HOXA1P49639 335 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 LUMP51884 338 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 S100A12P80511 92 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 AIMP2Q13155 320 aaKnown RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 CR1LQ2VPA4 569 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 HFEQ30201 348 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 ZNF101Q8IZC7 436 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 ZNF295-AS1Q8N0V1 137 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 C1orf162Q8NEQ5 155 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 BCL2L2Q92843 193 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 SIGLEC12Q96PQ1 595 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 SMAD5Q99717 465 aaKnown RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 TTTY12Q9BZ98 90 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 MS4A7Q9GZW8 240 aaPredicted RBP7.29□□□□□ -1.24
RAF1-212ENST00000494557 BANF2Q9H503 90 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 SLC2A9Q9NRM0 540 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 CLCF1Q9UBD9 225 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 MPC1Q9Y5U8 109 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 SEC16AO15027 2179 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 OR8U8P0C7N1 319 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 DANCRP0C864 163 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 AMY2BP19961 511 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 TCN2P20062 427 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 RAB5CP51148 216 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 POLR2GP62487 172 aaKnown RBP eCLIP7.29□□□□□ -1.24
RAF1-212ENST00000494557 BTN1A1Q13410 526 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 HERPUD1Q15011 391 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 TAF13Q15543 124 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 Q6P435 159 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 DPPA3Q6W0C5 159 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 CHMP1BQ7LBR1 199 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 AAED1Q7RTV5 226 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 C6orf201Q7Z4U5 140 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 C1QTNF6Q9BXI9 259 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 STRADBQ9C0K7 418 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 TMEM222Q9H0R3 208 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 NCOR1P1Q9H4R4 102 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 COMMD9Q9P000 198 aa7.29□□□□□ -1.24
RAF1-212ENST00000494557 CFAP54Q96N23 3096 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 OR5B21A6NL26 309 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 K7EPK0 472 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 TSPAN9O75954 239 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 SFTPBP07988 381 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 SLC2A1P11166 492 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 ATF4P18848 351 aaPredicted RBP7.28□□□□□ -1.24
RAF1-212ENST00000494557 FUT3P21217 361 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 EIF5AP63241 154 aaKnown RBP7.28□□□□□ -1.24
RAF1-212ENST00000494557 OC90Q02509 493 aaPredicted RBP7.28□□□□□ -1.24
RAF1-212ENST00000494557 PJVKQ0ZLH3 352 aa7.28□□□□□ -1.24
RAF1-212ENST00000494557 OR8G1Q15617 311 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms