RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ZW10O43264 779 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ZNF207O43670 478 aaKnown RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 MPZL2O60487 215 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 PLIN3O60664 434 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 MPZL1O95297 269 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 HLA-DQA1P01909 254 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 RLN2P04090 185 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 CD74P04233 296 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 CDK1P06493 297 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 KRT7P08729 469 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 SNRPAP09012 282 aaKnown RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 CECR9P0C854 216 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 C1GALT1C1LP0DN25 315 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ZNF823P16415 610 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 TAC1P20366 129 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 IL3RAP26951 378 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ELK4P28324 431 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 EVI2BP34910 448 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 GTF2A1P52655 376 aaPredicted RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 DLX6P56179 175 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 MYL6P60660 151 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 B2MP61769 119 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 PPP1CAP62136 330 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 GRB2P62993 217 aaKnown RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 EIF4EBP1Q13541 118 aaPredicted RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ZNF404Q494X3 552 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 Q499Y3 187 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 RNASE13Q5GAN3 156 aaKnown RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 TEX30Q5JUR7 227 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 CDKL4Q5MAI5 379 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 FAM162BQ5T6X4 162 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 Q5W150 140 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 KCTD16Q68DU8 428 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 FAM183BPQ6ZVS7 135 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 USP50Q70EL3 339 aaPredicted RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 NT5DC3Q86UY8 548 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 LINC00337Q8N6G1 96 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 SLC25A29Q8N8R3 303 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ZNF565Q8N9K5 539 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 SLC26A10Q8NG04 563 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 OR2M7Q8NG81 312 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 OR4M2Q8NGB6 313 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 OR4K5Q8NGD3 323 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 OR5M1Q8NGP8 315 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 OR5W2Q8NH69 310 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ERMNQ8TAM6 284 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ZNF420Q8TAQ5 688 aaPredicted RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ZNF721Q8TF20 911 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ORAOV1Q8WV07 137 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 BLNKQ8WV28 456 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 CPNE4Q96A23 557 aaPredicted RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 CMTM5Q96DZ9 223 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 YIPF6Q96EC8 236 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 POTEKPQ9BYX7 375 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 API5Q9BZZ5 524 aaKnown RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 FGF23Q9GZV9 251 aaPredicted RBP1.46□□□□□ -2.18
LMNB1-207ENST00000494185 VCX3BQ9H321 246 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 MFSD1Q9H3U5 465 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 POMKQ9H5K3 350 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 UCK1Q9HA47 277 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 PLEKHJ1Q9NW61 149 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 COMMD9Q9P000 198 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 TBX21Q9UL17 535 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ENPP4Q9Y6X5 453 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 ARHGAP21Q5T5U3 1957 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 AK9Q5TCS8 1911 aa1.46□□□□□ -2.18
LMNB1-207ENST00000494185 NUP153P49790 1475 aaKnown RBP1.45□□□□□ -2.18
LMNB1-207ENST00000494185 PIKFYVEQ9Y2I7 2098 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 A0A1W2PP18 115 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 CD300LBA8K4G0 201 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 GOLGA8KD6RF30 607 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 GOLGA8MH3BSY2 632 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 I3L4J1 428 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 HPGDSO60760 199 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 ADAP1O75689 374 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 VAMP5O95183 116 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 DEXIO95424 95 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 OR56A5P0C7T3 313 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 OCM2P0CE71 109 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 SLC2A1P11166 492 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 PSKH1P11801 424 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 PVALBP20472 110 aaPredicted RBP1.45□□□□□ -2.18
LMNB1-207ENST00000494185 ME2P23368 584 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 HOXA6P31267 233 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 CXCL12P48061 93 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 TGM4P49221 684 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 CDC34P49427 236 aaPredicted RBP1.45□□□□□ -2.18
LMNB1-207ENST00000494185 LINC00315P59091 139 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 HBG1P69891 147 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 HBG2P69892 147 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 FAM3AP98173 230 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 MADCAM1Q13477 382 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 PTGES3Q15185 160 aaKnown RBP1.45□□□□□ -2.18
LMNB1-207ENST00000494185 CLEC12BQ2HXU8 276 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 LRRC26Q2I0M4 334 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 DEFB116Q30KQ4 102 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 YIF1BQ5BJH7 314 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 MED27Q6P2C8 311 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 FAM173BQ6P4H8 233 aa1.45□□□□□ -2.18
LMNB1-207ENST00000494185 FAM231DQ6ZW35 169 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms