RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	DPM3	Q9P2X0	92 aa		10.87	□□□□□ -0.67
SAMM50-204	ENST00000493161	MRM2	Q9UI43	246 aa	Known RBP	10.87	□□□□□ -0.67
SAMM50-204	ENST00000493161	HHLA2	Q9UM44	414 aa		10.87	□□□□□ -0.67
SAMM50-204	ENST00000493161		B2RBV5	119 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	PRKY	O43930	277 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	IGLV1-47	P01700	117 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	PEX2	P28328	305 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	BRS3	P32247	399 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	OR3A1	P47881	315 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	NPBWR2	P48146	333 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	THBS3	P49746	956 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	SNU13	P55769	128 aa	Known RBP	10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	BDH1	Q02338	343 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	ZNF91	Q05481	1191 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	IL18R1	Q13478	541 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	SSX6	Q7RTT6	188 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	TRAPPC6B	Q86SZ2	158 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	OSR2	Q8N2R0	312 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	CAPSL	Q8WWF8	208 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	EMG1	Q92979	244 aa	Known RBP	10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	AKR1E2	Q96JD6	320 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	ZNF286A	Q9HBT8	521 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	TMEM14A	Q9Y6G1	99 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161	RYR2	Q92736	4967 aa		10.86	□□□□□ -0.67
SAMM50-204	ENST00000493161		H3BUI4	141 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	GNGT2	O14610	69 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	RPP14	O95059	124 aa	Known RBP	10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	BCL3	P20749	454 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	CCL1	P22362	96 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	CDK2	P24941	298 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	RPL23A	P62750	156 aa	Known RBP	10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	GK3P	Q14409	553 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	NKAPL	Q5M9Q1	402 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	ZBTB49	Q6ZSB9	765 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	C8orf86	Q6ZUL3	223 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	SLC35F2	Q8IXU6	374 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	TFAP2C	Q92754	450 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	DPF1	Q92782	380 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	NOL4L	Q96MY1	436 aa	Predicted RBP	10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	DUX3	Q96PT4	197 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	CNN2	Q99439	309 aa	Known RBP	10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	MOB1A	Q9H8S9	216 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	ADGRL4	Q9HBW9	690 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	SLC7A11	Q9UPY5	501 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	SNX5	Q9Y5X3	404 aa		10.85	□□□□□ -0.67
SAMM50-204	ENST00000493161	PSMB11	A5LHX3	300 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	DHRS7C	A6NNS2	312 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	LEUTX	A8MZ59	168 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	LY6L	H3BQJ8	138 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	SIRPB1	O00241	398 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	ENTPD6	O75354	484 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	E2F6	O75461	281 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	SNRNP70	P08621	437 aa	Known RBP	10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	P2RX3	P56373	397 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	CBX1	P83916	185 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	TPTE2P1	Q5T6R2	138 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	SLX4IP	Q5VYV7	408 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	OR2W3	Q7Z3T1	314 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	CANT1	Q8WVQ1	401 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	CCDC124	Q96CT7	223 aa	Known RBP	10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	ZNF556	Q9HAH1	456 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	MED4	Q9NPJ6	270 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	LINC00527	Q9UJ94	153 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	ARL2BP	Q9Y2Y0	163 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161		U3KQK5	164 aa		10.84	□□□□□ -0.67
SAMM50-204	ENST00000493161		H0YHG0	523 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	BUB1B-PAK6	H3BSN5	160 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	MGST3	O14880	152 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	ERP29	P30040	261 aa	Known RBP	10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	GLIPR1	P48060	266 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	FUT6	P51993	359 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	CRISP1	P54107	249 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	HLA-DRB5	Q30154	266 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	HEPN1	Q6WQI6	88 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	MEPCE	Q7L2J0	689 aa	Known RBP	10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	PIGW	Q7Z7B1	504 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	RTN4RL2	Q86UN3	420 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	CATSPERD	Q86XM0	798 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	FAM58A	Q8N1B3	248 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	OR51D1	Q8NGF3	324 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	ZNF596	Q8TC21	504 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	P2RX4	Q99571	388 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	TBX5	Q99593	518 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	GPR61	Q9BZJ8	451 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	PLEKHA1	Q9HB21	404 aa		10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	SEBOX	Q9HB31	216 aa	Predicted RBP	10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.83	□□□□□ -0.68
SAMM50-204	ENST00000493161	ZNF670-ZNF695	F2Z2N8	137 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	SYT7	O43581	403 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	ANXA8	P13928	327 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	PRKACA	P17612	351 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	OR3A4P	P47883	348 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	POU3F4	P49335	361 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	DGCR2	P98153	550 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	AES	Q08117	197 aa		10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	RBM39	Q14498	530 aa	Known RBP	10.82	□□□□□ -0.68
SAMM50-204	ENST00000493161	ZNF146	Q15072	292 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms