RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 TMEM200AQ86VY9 491 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 CCDC36Q8IYA8 594 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 ZNF205O95201 554 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 RPA2P15927 270 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 C3P1Q6ZMU1 363 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 CITED4Q96RK1 184 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 C1QTNF6Q9BXI9 259 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 IL36RNQ9UBH0 155 aa14.34□□□□□ -0.11
TOM1-216ENST00000492723 RP2O75695 350 aa14.33□□□□□ -0.11
TOM1-216ENST00000492723 SERPINF1P36955 418 aa14.33□□□□□ -0.11
TOM1-216ENST00000492723 ZNF660Q6AZW8 331 aaPredicted RBP14.33□□□□□ -0.11
TOM1-216ENST00000492723 IGFL3Q6UXB1 125 aa14.33□□□□□ -0.11
TOM1-216ENST00000492723 OR6K3Q8NGY3 331 aa14.33□□□□□ -0.11
TOM1-216ENST00000492723 PCNPQ8WW12 178 aaKnown RBP14.33□□□□□ -0.11
TOM1-216ENST00000492723 MARS2Q96GW9 593 aaKnown RBP14.33□□□□□ -0.11
TOM1-216ENST00000492723 LIME1Q9H400 295 aa14.33□□□□□ -0.11
TOM1-216ENST00000492723 RDH8Q9NYR8 311 aa14.33□□□□□ -0.11
TOM1-216ENST00000492723 SMPD2O60906 423 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 ECI1P42126 302 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 PPP1CBP62140 327 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 GNG3P63215 75 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 ANKRD55Q3KP44 614 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 OR2A2Q6IF42 318 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 C11orf87Q6NUJ2 197 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 GSG1LQ6UXU4 331 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 COQ8AQ8NI60 647 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 EXTL1Q92935 676 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 POM121Q96HA1 1249 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 OR2J1Q9GZK6 312 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 ZNF286AQ9HBT8 521 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 CHMP1AQ9HD42 196 aaPredicted RBP14.33□□□□□ -0.12
TOM1-216ENST00000492723 SVILO95425 2214 aa14.33□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A10PA6NDY2 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A18PA6NE21 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A16PA6NEW6 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A20PA6NIJ5 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A8PA6NJQ4 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A7PA6NKC0 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 OR5B21A6NL26 309 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A22PA8MWA6 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A12PA8MX19 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A5PA8MXJ8 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A23PA8MXZ1 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 AHRRA9YTQ3 701 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 CNOT4O95628 575 aaKnown RBP14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A15PP0C7V4 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A13PP0C7W8 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A14PP0C7W9 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FAM90A24PP0C7X0 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 HOXC12P31275 282 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 ATXN7L3Q14CW9 347 aaPredicted RBP14.32□□□□□ -0.12
TOM1-216ENST00000492723 NSUN5P2Q63ZY6 315 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 TMEM211Q6ICI0 200 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 INO80CQ6PI98 192 aaPredicted RBP14.32□□□□□ -0.12
TOM1-216ENST00000492723 ZNF573Q86YE8 665 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 ZNF488Q96MN9 340 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 IRF2BPLQ9H1B7 796 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 PTPRZ1P23471 2315 aaPredicted RBP14.32□□□□□ -0.12
TOM1-216ENST00000492723 ADAP1O75689 374 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 RPS2P15880 293 aaKnown RBP14.32□□□□□ -0.12
TOM1-216ENST00000492723 PRKACAP17612 351 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 DUSP1P28562 367 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 ERVS71-1P61550 626 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 IGFBP7Q16270 282 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 FBXW12Q6X9E4 464 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 Q6ZPA2 131 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 ASCL5Q7RTU5 278 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 TOMM40LQ969M1 308 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 LHX6Q9UPM6 363 aa14.32□□□□□ -0.12
TOM1-216ENST00000492723 J3QW42 95 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 AGFG2O95081 481 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 PDGFAP04085 211 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 CALCRP30988 508 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 PMELP40967 661 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 IKZF1Q13422 519 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 DHRS11Q6UWP2 260 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 DKK4Q9UBT3 224 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 MGAQ8IWI9 3026 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 A0A0B4J2A0 478 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 HSPB6O14558 160 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 COX5AP20674 150 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 PTGER4P35408 488 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 NHLRC3Q5JS37 347 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 TMEM65Q6PI78 240 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 SNIP1Q8TAD8 396 aaKnown RBP14.31□□□□□ -0.12
TOM1-216ENST00000492723 WDR13Q9H1Z4 485 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 RAB18Q9NP72 206 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 SHPKQ9UHJ6 478 aa14.31□□□□□ -0.12
TOM1-216ENST00000492723 DSPP15924 2871 aaKnown RBP14.31□□□□□ -0.12
TOM1-216ENST00000492723 CTSDP07339 412 aaPredicted RBP14.3□□□□□ -0.12
TOM1-216ENST00000492723 SLC25A4P12235 298 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 FCGR2CP31995 323 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 FXYD4P59646 89 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 RAB14P61106 215 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 THAP6Q8TBB0 222 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 METTL8Q9H825 291 aaKnown RBP14.3□□□□□ -0.12
TOM1-216ENST00000492723 DECR2Q9NUI1 292 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 CACNA1GO43497 2377 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 UCP2P55851 309 aa14.3□□□□□ -0.12
TOM1-216ENST00000492723 MPV17LQ2QL34 196 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms