RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TFAP2CQ92754 450 aa7.89□□□□□ -1.15
TMEM39A-210ENST00000490099 ADAT3Q96EY9 351 aaPredicted RBP7.89□□□□□ -1.15
TMEM39A-210ENST00000490099 CEP19Q96LK0 163 aa7.89□□□□□ -1.15
TMEM39A-210ENST00000490099 ANKRD60Q9BZ19 345 aa7.89□□□□□ -1.15
TMEM39A-210ENST00000490099 MRPS18AQ9NVS2 196 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-210ENST00000490099 IMPAD1Q9NX62 359 aa7.89□□□□□ -1.15
TMEM39A-210ENST00000490099 HSPE1-MOB4S4R3N1 261 aa7.89□□□□□ -1.15
TMEM39A-210ENST00000490099 LOC107986453A0A1B0GWG9 222 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 hCG_1809904A0A1W2PP81 198 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 A0A1W2PPE2 198 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 FAM230AA0A1W2PPH8 454 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 A0A1W2PR64 198 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 A0A1W2PRV1 198 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 BTBD17A6NE02 478 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ODF3BA8MYP8 253 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 DENRO43583 198 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ANGPTL7O43827 346 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 PAHP00439 452 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF728P0DKX0 622 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ATF1P18846 271 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 LMO1P25800 156 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ATP6V1E1P36543 226 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 RBP2P50120 134 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 CAPZA1P52907 286 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 OR12D2P58182 307 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ERVFRD-1P60508 538 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ACTC1P68032 377 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 ACTA1P68133 377 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 MEF2CQ06413 473 aaPredicted RBP7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 MED21Q13503 144 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 LRRC75BQ2VPJ9 315 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 TP53I3Q53FA7 332 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 DHRS7BQ6IAN0 325 aaPredicted RBP7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 SLC25A26Q70HW3 274 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 Q8IYB0 196 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 OR8H2Q8N162 312 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 OR4M1Q8NGD0 313 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 OR52N4Q8NGI2 321 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 TRMT10AQ8TBZ6 339 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 SPSB1Q96BD6 273 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 RNFT2Q96EX2 444 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 SNX22Q96L94 193 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 SSX3Q99909 188 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 CDCA4Q9BXL8 241 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 GNG8Q9UK08 70 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 LRRC42Q9Y546 428 aa7.88□□□□□ -1.15
TMEM39A-210ENST00000490099 TRBV2A0A0J9YWF9 115 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 H3BUX3 64 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 TIMM23O14925 209 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 IGHA1P01876 353 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 PRKACBP22694 351 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 MYF6P23409 242 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 ERP29P30040 261 aaKnown RBP7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 NPBWR2P48146 333 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 DYNLT3P51808 116 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 EFNB2P52799 333 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF91Q05481 1191 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 PDZK1IP1Q13113 114 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 ODF4Q2M2E3 257 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF691Q5VV52 312 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF626Q68DY1 528 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 C11orf88Q6PI97 169 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 ENTHD1Q8IYW4 607 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 DYNAPQ8N1N2 210 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 Q8N2B8 174 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 SYS1Q8N2H4 156 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 OR10AC1Q8NH08 325 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 CFHR4Q92496 578 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 SLAMF9Q96A28 289 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 FGGYQ96C11 551 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 LGALS12Q96DT0 336 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 MALSU1Q96EH3 234 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 PELI1Q96FA3 418 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 BORCS8Q96FH0 119 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 MMP27Q9H306 513 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 RANBP3Q9H6Z4 567 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 PLEKHA1Q9HB21 404 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 OR14J1Q9UGF5 321 aa7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 TBL2Q9Y4P3 447 aaKnown RBP7.87□□□□□ -1.15
TMEM39A-210ENST00000490099 IGKV1-12A0A0C4DH73 117 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 DAPL1A0PJW8 107 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 SNTNA6NMZ2 147 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 M0QZ24 198 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 CHST1O43916 411 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 PSPNO60542 156 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 IGKV1D-12P01611 117 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 RPSAP08865 295 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 IGHV1-8P0DP01 117 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 ATP1B3P54709 279 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 MTCP1P56278 107 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 ALKBH1Q13686 389 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 GALEQ14376 348 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 CNN3Q15417 329 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 SPIN3Q5JUX0 258 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 ZNF529Q6P280 563 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 LHFPL2Q6ZUX7 228 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 RNF144BQ7Z419 303 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 FAM220AQ7Z4H9 259 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 SAXO1Q8IYX7 474 aa7.86□□□□□ -1.15
TMEM39A-210ENST00000490099 FAM58AQ8N1B3 248 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms