RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 OR52N4Q8NGI2 321 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 OR5D18Q8NGL1 313 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 OR5D14Q8NGL3 314 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 TSEN15Q8WW01 171 aaKnown RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 C17orf50Q8WW18 174 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 RGP1Q92546 391 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 SNX22Q96L94 193 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 ZNF747Q9BV97 191 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 SEBOXQ9HB31 216 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 ZNRD1Q9P1U0 126 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 DIMT1Q9UNQ2 313 aaKnown RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 DHDHQ9UQ10 334 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 CAB39Q9Y376 341 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 A0A1W2PPH5 198 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 SULT1B1O43704 296 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 GPR137BO60478 399 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 PSPNO60542 156 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 CRYBA1P05813 215 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 RPSAP08865 295 aaKnown RBP10.52□□□□□ -0.73
HDAC1-209ENST00000484305 PRKACAP17612 351 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 EDDM3BP56851 147 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 RELBQ01201 579 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 ACSM1Q08AH1 577 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 IL18R1Q13478 541 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 ZNF146Q15072 292 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 CDK5R1Q15078 307 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 TAF9Q16594 264 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 CCDC58Q4VC31 144 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 GDPD3Q7L5L3 318 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 OR8H2Q8N162 312 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 SETD9Q8NE22 299 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 HAVCR2Q8TDQ0 301 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 DYRK2Q92630 601 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 GGHQ92820 318 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 AJUBAQ96IF1 538 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 DPAGT1Q9H3H5 408 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 HMG20AQ9NP66 347 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 C1RLQ9NZP8 487 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 CLEC2DQ9UHP7 191 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 SF3B6Q9Y3B4 125 aaKnown RBP10.52□□□□□ -0.73
HDAC1-209ENST00000484305 SIRT4Q9Y6E7 314 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-209ENST00000484305 KIAA2026Q5HYC2 2103 aa10.52□□□□□ -0.73
HDAC1-209ENST00000484305 IRGMA1A4Y4 181 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 KDM4BO94953 1096 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 ALX3O95076 343 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 PAHP00439 452 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 LALBAP00709 142 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 HCKP08631 526 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 GABRR1P24046 479 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 CAPGP40121 348 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 SOX2P48431 317 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 ZP1P60852 638 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 EDDM3AQ14507 147 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 KISS1Q15726 138 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 SPIN3Q5JUX0 258 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 ASPHD2Q6ICH7 369 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 LAIR2Q6ISS4 152 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 RPL22L1Q6P5R6 122 aaKnown RBP10.51□□□□□ -0.73
HDAC1-209ENST00000484305 TMPRSS11AQ6ZMR5 421 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 ZNF782Q6ZMW2 699 aaPredicted RBP10.51□□□□□ -0.73
HDAC1-209ENST00000484305 TPRX1Q8N7U7 411 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 OR4S1Q8NGB4 309 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 RPS4Y2Q8TD47 263 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 TMEM80Q96HE8 168 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 CHST6Q9GZX3 395 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 HEXA-AS1Q9H8Q6 139 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 NEK6Q9HC98 313 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 BABAM2Q9NXR7 383 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 GSTK1Q9Y2Q3 226 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 EXOSC1Q9Y3B2 195 aaKnown RBP10.51□□□□□ -0.73
HDAC1-209ENST00000484305 HSPE1-MOB4S4R3N1 261 aa10.51□□□□□ -0.73
HDAC1-209ENST00000484305 NBEAL1Q6ZS30 2694 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 hCG_1809904A0A1W2PP81 198 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 A0A1W2PPE2 198 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 A0A1W2PR64 198 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 A0A1W2PRV1 198 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 POM121CA8CG34 1229 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 C17orf98A8MV24 154 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 SIRPB1O00241 398 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 OGG1O15527 345 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 XPNPEP2O43895 674 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 MYL12AP19105 171 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 COX7A1P24310 79 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 PAX6P26367 422 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 BMXP51813 675 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 RAG2P55895 527 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 ST3GAL4Q11206 333 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 GRK1Q15835 563 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 MIDNQ504T8 468 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 ZNF529Q6P280 563 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 SHISA2Q6UWI4 295 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 TCF23Q7RTU1 214 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 SAXO1Q8IYX7 474 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 C8orf59Q8N0T1 100 aaPredicted RBP10.5□□□□□ -0.73
HDAC1-209ENST00000484305 OR51A2Q8NGJ7 313 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 DCLRE1BQ9H816 532 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 NKX1-2Q9UD57 310 aaPredicted RBP10.5□□□□□ -0.73
HDAC1-209ENST00000484305 MMP24Q9Y5R2 645 aa10.5□□□□□ -0.73
HDAC1-209ENST00000484305 SH2D1BO14796 132 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms