RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 EIF1P41567 113 aaKnown RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 GABRA4P48169 554 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 ELLP55199 621 aaPredicted RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 TESK1Q15569 626 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 UBAC2Q8NBM4 344 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 ZNF837Q96EG3 531 aaPredicted RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 GGACTQ9BVM4 153 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 WSB1Q9Y6I7 421 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 GPR137BO60478 399 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 RBP2P50120 134 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 DCDP81605 110 aaKnown RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 SRSF4Q08170 494 aaKnown RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 ARL6IP1Q15041 203 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 FBXO46Q6PJ61 603 aaPredicted RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 YRDCQ86U90 279 aaKnown RBP11.11□□□□□ -0.63
VPS52-218ENST00000482399 OR2C3Q8N628 320 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 RAB39BQ96DA2 213 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 MEGF10Q96KG7 1140 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 OXGR1Q96P68 337 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 OR51M1Q9H341 326 aa11.11□□□□□ -0.63
VPS52-218ENST00000482399 A0A087WZY1 265 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 PMS2P1A4D2B8 440 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 ADAM20O43506 726 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 SLC34A2O95436 690 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 TRGC2P03986 189 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 POU2F2P09086 479 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 OR8U8P0C7N1 319 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 PGA4P0DJD7 388 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 PGA3P0DJD8 388 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 CCL2P13500 99 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 AADACP22760 399 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 DLK1P80370 383 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 CXorf66Q5JRM2 361 aaPredicted RBP11.1□□□□□ -0.63
VPS52-218ENST00000482399 CCDC71LQ8N9Z2 235 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 SCGB1C1Q8TD33 95 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 AKIRIN1Q9H9L7 192 aaPredicted RBP11.1□□□□□ -0.63
VPS52-218ENST00000482399 DOK5Q9P104 306 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 B3GAT1Q9P2W7 334 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 KCNS2Q9ULS6 477 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 TRANK1O15050 2925 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 GPR179Q6PRD1 2367 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 RBFOX3A6NFN3 312 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 LILRA5A6NI73 299 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 CTSDP07339 412 aaPredicted RBP11.1□□□□□ -0.63
VPS52-218ENST00000482399 FOSL1P15407 271 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 EWSR1Q01844 656 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS52-218ENST00000482399 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
VPS52-218ENST00000482399 ZNF845Q96IR2 970 aaPredicted RBP11.1□□□□□ -0.63
VPS52-218ENST00000482399 SHDQ96IW2 340 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 GAB2Q9UQC2 676 aa11.1□□□□□ -0.63
VPS52-218ENST00000482399 KLF2Q9Y5W3 355 aaPredicted RBP11.1□□□□□ -0.63
VPS52-218ENST00000482399 IGKV3D-11A0A0A0MRZ8 115 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 CXorf65A6NEN9 183 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 LMO7DNF2Z398 122 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TNFSF11O14788 317 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 DHHO43323 396 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TRAF3IP2O43734 574 aaPredicted RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 IFNA5P01569 189 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 IAPPP10997 89 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 ZNF154Q13106 437 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 MPV17LQ2QL34 196 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 MYPOPQ86VE0 399 aaPredicted RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 LILRB2Q8N423 598 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 MRGPRX4Q96LA9 322 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 C8orf33Q9H7E9 229 aaPredicted RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 RARRES3Q9UL19 164 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 HSF4Q9ULV5 492 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 CCDC187A0A096LP49 1063 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TRAV39A0A0B4J263 110 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TP53I11O14683 189 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 GDF9O60383 454 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TIAF1O95411 115 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 NRASP01111 189 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TK1P04183 234 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 IFI6P09912 130 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 EDN3P14138 238 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 MMP9P14780 707 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 FAM3AP98173 230 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TMEM267Q0VDI3 215 aaPredicted RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 ZNF266Q14584 549 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 SHBQ15464 509 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 BEND4Q6ZU67 534 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 MVB12AQ96EY5 273 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 SNX22Q96L94 193 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 MYOTQ9UBF9 498 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 TIMM10BQ9Y5J6 103 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 SERPINE2P07093 398 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 ZNF17P17021 662 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 P2RY1P47900 373 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 IDH3GP51553 393 aaPredicted RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 ZNF133P52736 654 aaPredicted RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 NSUN5P2Q63ZY6 315 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 CDPF1Q6NVV7 123 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 ANKRD37Q7Z713 158 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 RDH5Q92781 318 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms