RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SPIN3Q5JUX0 258 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 PRR31Q5SQ13 230 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF691Q5VV52 312 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 TCF23Q7RTU1 214 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 FAM58AQ8N1B3 248 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 BEND2Q8NDZ0 799 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 OR5D18Q8NGL1 313 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 HAVCR2Q8TDQ0 301 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 TSEN15Q8WW01 171 aaKnown RBP8.29□□□□□ -1.08
SF3A3-204ENST00000462258 C17orf50Q8WW18 174 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 SPACA5Q96QH8 159 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF649Q9BS31 505 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 CHST6Q9GZX3 395 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 HEXA-AS1Q9H8Q6 139 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 NEK6Q9HC98 313 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 MRPS18AQ9NVS2 196 aaKnown RBP8.29□□□□□ -1.08
SF3A3-204ENST00000462258 CMYA5Q8N3K9 4069 aa8.29□□□□□ -1.08
SF3A3-204ENST00000462258 PKD1L1Q8TDX9 2849 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 MEX3AA1L020 520 aaKnown RBP8.28□□□□□ -1.08
SF3A3-204ENST00000462258 C17orf98A8MV24 154 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 E9PI62 339 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 H3BUX3 64 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 SULT1B1O43704 296 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 WBP4O75554 376 aaKnown RBP8.28□□□□□ -1.08
SF3A3-204ENST00000462258 KDM4BO94953 1096 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 CLIC3O95833 236 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 RBP4P02753 201 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 HCKP08631 526 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 RPSAP08865 295 aaKnown RBP8.28□□□□□ -1.08
SF3A3-204ENST00000462258 LIMS3P0CW19 117 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 LIMS4P0CW20 117 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 CALCBP10092 127 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 PEX2P28328 305 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 GBX2P52951 348 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-204ENST00000462258 DLX6P56179 175 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 PDZK1IP1Q13113 114 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF146Q15072 292 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 RCN1Q15293 331 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 GRK1Q15835 563 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 LRRC36Q1X8D7 754 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 LRRC75BQ2VPJ9 315 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 KLHL22Q53GT1 634 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 LPCAT4Q643R3 524 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 Q6ZSV7 163 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 C11orf42Q8N5U0 333 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 OR5AK2Q8NH90 309 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 CNIH3Q8TBE1 160 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 CYGBQ8WWM9 190 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 SNX22Q96L94 193 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF714Q96N38 554 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 PDCD1LG2Q9BQ51 273 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 JAM3Q9BX67 310 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 ZCCHC4Q9H5U6 513 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 ZNF696Q9H7X3 374 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 FGF20Q9NP95 211 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-204ENST00000462258 DHDHQ9UQ10 334 aa8.28□□□□□ -1.08
SF3A3-204ENST00000462258 IGKV1-12A0A0C4DH73 117 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 hADV38S2A0JD32 116 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 IRGMA1A4Y4 181 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 SIRPB1O00241 398 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 PSPNO60542 156 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 IGKV1D-12P01611 117 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 ZNF728P0DKX0 622 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 PAX6P26367 422 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 DUSP1P28562 367 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 OR3A1P47881 315 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 MEF2CQ06413 473 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 SRSF4Q08170 494 aaKnown RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 CDK5R1Q15078 307 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 RNF144BQ7Z419 303 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 SERPINA12Q8IW75 414 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 PARP16Q8N5Y8 322 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 PACRGLQ8N7B6 248 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 TPRX1Q8N7U7 411 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 ZSCAN4Q8NAM6 433 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 SETD9Q8NE22 299 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 OR52N4Q8NGI2 321 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 OR13D1Q8NGV5 346 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 LINC01006Q8NI28 216 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 PPP1R35Q8TAP8 253 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 RGP1Q92546 391 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 FOXRED1Q96CU9 486 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 CPNE2Q96FN4 548 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 AJUBAQ96IF1 538 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 SSX3Q99909 188 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 PPA2Q9H2U2 334 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 SEBOXQ9HB31 216 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 HMG20AQ9NP66 347 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 EXOSC4Q9NPD3 245 aaKnown RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 C8orf4Q9NR00 106 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-204ENST00000462258 GLS2Q9UI32 602 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 GSTK1Q9Y2Q3 226 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 RNF114Q9Y508 228 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 PCDHGB5Q9Y5G0 923 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 LINC00312Q9Y6C7 94 aa8.27□□□□□ -1.09
SF3A3-204ENST00000462258 ODF3BA8MYP8 253 aa8.26□□□□□ -1.09
SF3A3-204ENST00000462258 MGST3O14880 152 aa8.26□□□□□ -1.09
SF3A3-204ENST00000462258 CLPXO76031 633 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms