RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 CELP19835 753 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 PRDX2P32119 198 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 SOX2P48431 317 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 BCAP31P51572 246 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 ZP1P60852 638 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 RPS11P62280 158 aaKnown RBP eCLIP9.81□□□□□ -0.84
VPS52-213ENST00000461743 IKZF1Q13422 519 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 ZNF146Q15072 292 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 TRAM1Q15629 374 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 DGUOKQ16854 277 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 ASPHD2Q6ICH7 369 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 DUX4L9Q6RFH8 374 aaPredicted RBP9.81□□□□□ -0.84
VPS52-213ENST00000461743 USP43Q70EL4 1123 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 CMTM4Q8IZR5 234 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 FAM58AQ8N1B3 248 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 TMEM185AQ8NFB2 350 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 PXT1Q8NFP0 134 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 OR5T2Q8NGG2 359 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 CHPT1Q8WUD6 406 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 UFD1Q92890 307 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 ISOC1Q96CN7 298 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 SUCNR1Q9BXA5 334 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 TMEM138Q9NPI0 162 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 TAS2R4Q9NYW5 299 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 DUX4Q9UBX2 424 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 GLS2Q9UI32 602 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 NUP50Q9UKX7 468 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 FOXJ3Q9UPW0 622 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 MAB21L2Q9Y586 359 aa9.81□□□□□ -0.84
VPS52-213ENST00000461743 TRBV5-7A0A0A0MS05 114 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 A0A1W2PPH5 198 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 M0R1W7 72 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 TCF21O43680 179 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 CHRM2P08172 466 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 SELLP14151 372 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 MMP9P14780 707 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 NDUFB7P17568 137 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 BCL3P20749 454 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 FPR2P25090 351 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 PSMA1P25786 263 aaKnown RBP9.8□□□□□ -0.84
VPS52-213ENST00000461743 BDKRB2P30411 391 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 MTNR1BP49286 362 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 FGF12P61328 243 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 MLLT11Q13015 90 aaPredicted RBP9.8□□□□□ -0.84
VPS52-213ENST00000461743 PDCD1Q15116 288 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 MED22Q15528 200 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 DDI2Q5TDH0 399 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 ELP2Q6IA86 826 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 CRIP3Q6Q6R5 217 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 C1orf122Q6ZSJ8 110 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 C9orf139Q6ZV77 190 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 CDH26Q8IXH8 852 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 CD177Q8N6Q3 437 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 NKAIN3Q8N8D7 197 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 ZFP41Q8N8Y5 198 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 ZNF418Q8TF45 676 aaPredicted RBP9.8□□□□□ -0.84
VPS52-213ENST00000461743 DERL3Q96Q80 235 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 OR14A2Q96R54 314 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 JMJD8Q96S16 334 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 YTHDF1Q9BYJ9 559 aaKnown RBP9.8□□□□□ -0.84
VPS52-213ENST00000461743 CNTD2Q9H8S5 307 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 HMG20AQ9NP66 347 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 IL36GQ9NZH8 169 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 OR14J1Q9UGF5 321 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 KIAA2026Q5HYC2 2103 aa9.8□□□□□ -0.84
VPS52-213ENST00000461743 TRAV40A0A0B4J280 105 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 FUOMA2VDF0 154 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 K7N7A8 449 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 SPRY1O43609 319 aaPredicted RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 ZNF737O75373 536 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 TOX4O94842 621 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 HAND1O96004 215 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 TK1P04183 234 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 PRKACAP17612 351 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 EEF1B2P24534 225 aaKnown RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 CAPZA1P52907 286 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 DOC2BQ14184 412 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 TUSC1Q2TAM9 212 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 KLF17Q5JT82 389 aaPredicted RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 GPR157Q5UAW9 335 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 METAP1DQ6UB28 335 aaPredicted RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 ZNF367Q7RTV3 350 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 CLVS1Q8IUQ0 354 aaPredicted RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 OR8H2Q8N162 312 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 BPIFB2Q8N4F0 458 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 CHST4Q8NCG5 386 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 ZNRF1Q8ND25 227 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 OR51A2Q8NGJ7 313 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 OR5D13Q8NGL4 314 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 OR13C5Q8NGS8 318 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 PPP1R35Q8TAP8 253 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 C17orf50Q8WW18 174 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 H1FXQ92522 213 aaKnown RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 SGCDQ92629 289 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 RFT1Q96AA3 541 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 SNX22Q96L94 193 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 WDFY2Q96P53 400 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 SPACA5Q96QH8 159 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 OR5M11Q96RB7 305 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms