RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 Q9H521 79 aa16.93■□□□□ 0.3
HSPG2-205ENST00000427897 ZCCHC4Q9H5U6 513 aa16.93■□□□□ 0.3
HSPG2-205ENST00000427897 BEX1Q9HBH7 125 aa16.93■□□□□ 0.3
HSPG2-205ENST00000427897 MRPS18AQ9NVS2 196 aaKnown RBP16.93■□□□□ 0.3
HSPG2-205ENST00000427897 CHCHD3Q9NX63 227 aaKnown RBP16.93■□□□□ 0.3
HSPG2-205ENST00000427897 DHDHQ9UQ10 334 aa16.93■□□□□ 0.3
HSPG2-205ENST00000427897 K7N7A8 449 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 MAGEB3O15480 346 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 SPRY1O43609 319 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-205ENST00000427897 MYF6P23409 242 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 GABRR1P24046 479 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 IER3P46695 156 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 SNU13P55769 128 aaKnown RBP16.92■□□□□ 0.3
HSPG2-205ENST00000427897 LGALS4P56470 323 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 LDLRAD3Q86YD5 345 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 FAM58AQ8N1B3 248 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 PNKDQ8N490 385 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 SGMS2Q8NHU3 365 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 FBLIM1Q8WUP2 373 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 TAF15Q92804 592 aaKnown RBP eCLIP16.92■□□□□ 0.3
HSPG2-205ENST00000427897 SNX22Q96L94 193 aa16.92■□□□□ 0.3
HSPG2-205ENST00000427897 IGKV1-9A0A0C4DH69 117 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 A0A1B0GUS0 222 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 F8VVB4 439 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 F8VWA3 439 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 HAND1O96004 215 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 CALCBP10092 127 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 MYL12AP19105 171 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 BCL3P20749 454 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 MDKP21741 143 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-205ENST00000427897 RAG2P55895 527 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 ERVFRD-1P60508 538 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 PDZK1IP1Q13113 114 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 EDDM3AQ14507 147 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 SMN1Q16637 294 aaKnown RBP16.91■□□□□ 0.3
HSPG2-205ENST00000427897 PPP1R35Q8TAP8 253 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 TNFRSF14Q92956 283 aa16.91■□□□□ 0.3
HSPG2-205ENST00000427897 FGF20Q9NP95 211 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-205ENST00000427897 SH2D1BO14796 132 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 GPR137BO60478 399 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 CCL3L1P16619 93 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 DCKP27707 260 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 DUSP1P28562 367 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 NPBWR2P48146 333 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 RPL15P61313 204 aaKnown RBP16.9■□□□□ 0.3
HSPG2-205ENST00000427897 GDPGP1Q6ZNW5 385 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 OR5D18Q8NGL1 313 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 SPACA5Q96QH8 159 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 PDCD1LG2Q9BQ51 273 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 RBFOX1Q9NWB1 397 aaKnown RBP16.9■□□□□ 0.3
HSPG2-205ENST00000427897 GSTK1Q9Y2Q3 226 aa16.9■□□□□ 0.3
HSPG2-205ENST00000427897 EFCAB10A6NFE3 127 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 E9PI62 339 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 ZFPL1O95159 310 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 TMEM225BP0DP42 221 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 COX7A1P24310 79 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 SCN1BQ07699 218 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 GRK1Q15835 563 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 MIDNQ504T8 468 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 C17orf107Q6ZR85 190 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 OR8H2Q8N162 312 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 CPNE2Q96FN4 548 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-205ENST00000427897 GPER1Q99527 375 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 EXOSC4Q9NPD3 245 aaKnown RBP16.89■□□□□ 0.29
HSPG2-205ENST00000427897 PLCXD1Q9NUJ7 323 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 C1RLQ9NZP8 487 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 ZNRD1Q9P1U0 126 aa16.89■□□□□ 0.29
HSPG2-205ENST00000427897 hADV38S2A0JD32 116 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 SULT1B1O43704 296 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 MT-ND2P03891 347 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 CD2P06729 351 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 ETV1P50549 477 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 GTF2A1P52655 376 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-205ENST00000427897 ZNF273Q14593 569 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 SPIN3Q5JUX0 258 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 RPL22L1Q6P5R6 122 aaKnown RBP16.88■□□□□ 0.29
HSPG2-205ENST00000427897 SATL1Q86VE3 508 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 CHST6Q9GZX3 395 aa16.88■□□□□ 0.29
HSPG2-205ENST00000427897 CNOT2Q9NZN8 540 aaKnown RBP16.88■□□□□ 0.29
HSPG2-205ENST00000427897 EXOSC1Q9Y3B2 195 aaKnown RBP16.88■□□□□ 0.29
HSPG2-205ENST00000427897 MEX3AA1L020 520 aaKnown RBP16.87■□□□□ 0.29
HSPG2-205ENST00000427897 LIMS3P0CW19 117 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 LIMS4P0CW20 117 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 ZNF728P0DKX0 622 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 RAB3AP20336 220 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 SOX2P48431 317 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 MEF2CQ06413 473 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-205ENST00000427897 CCDC58Q4VC31 144 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 C6orf141Q5SZD1 244 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 DHRS7BQ6IAN0 325 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-205ENST00000427897 ZNF782Q6ZMW2 699 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-205ENST00000427897 TRAPPC6BQ86SZ2 158 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 BPIFB6Q8NFQ5 453 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 OR13D1Q8NGV5 346 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 OR5R1Q8NH85 324 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 GPR148Q8TDV2 347 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 TMEM80Q96HE8 168 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 CNBD2Q96M20 576 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 JAM3Q9BX67 310 aa16.87■□□□□ 0.29
HSPG2-205ENST00000427897 RHOFQ9HBH0 211 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms